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SCNpilot_BF_INOC_scaffold_1532

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1532_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..360
DNA (360bp) protein (120aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Bacteroidales RepID=D0TDJ6_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS43097.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Pa
membrane fusion efflux protein
SCNpilot_BF_INOC_scaffold_1532_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

378..1724
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YKE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14232.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnson
outer membrane transport/efflux protein
SCNpilot_BF_INOC_scaffold_1532_3
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1805..2629)
DNA (825bp) protein (275aa)
Elongation factor Ts n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UHX0_TANFA
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1411148 species="Bacteria; Bacteroidetes; Bacteroidia; Bact
tsf; translation elongation factor Ts
SCNpilot_BF_INOC_scaffold_1532_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2752..3594)
DNA (843bp) protein (281aa)
30S ribosomal protein S2 n=3 Tax=Parabacteroides RepID=K5ZQQ9_9PORP
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides g
rpsB; 30S ribosomal protein S2
SCNpilot_BF_INOC_scaffold_1532_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3732..4118)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=3 Tax=Parabacteroides RepID=K5ZQ72_9PORP
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroide
rpsI; 30S ribosomal protein S9
SCNpilot_BF_INOC_scaffold_1532_6
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4124..4579)
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=9 Tax=Bacteroidales RepID=A6LHM5_PARD8
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroi
rplM; 50S ribosomal protein L13
SCNpilot_BF_INOC_scaffold_1532_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4779..5399)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y590_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13567.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
hypothetical protein
SCNpilot_BF_INOC_scaffold_1532_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6522..7829
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EC13_9BACE
hypothetical protein
Phage integrase family protein {ECO:0000313|EMBL:EXY86184.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis st
SCNpilot_BF_INOC_scaffold_1532_9
unknown

Not on your lists

7840..8808
DNA (969bp) protein (323aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8946..9293
DNA (348bp) protein (116aa)
DNA binding domain, excisionase family n=2 Tax=Parabacteroides RepID=E1Z149_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN29733.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distaso
SCNpilot_BF_INOC_scaffold_1532_11
unknown

Not on your lists

9293..9565
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_12
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9562..10338
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9TG27_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY68191.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C
hypothetical protein
SCNpilot_BF_INOC_scaffold_1532_13
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10343..11767
DNA (1425bp) protein (475aa)
Replicative DNA helicase n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6SA06_9BACE
Replicative DNA helicase {ECO:0000313|EMBL:KKB46918.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. H
replicative DNA helicase
SCNpilot_BF_INOC_scaffold_1532_14
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11779..12039
DNA (261bp) protein (87aa)
VRR-NUC domain protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5J7S5_9BACE
VRR-NUC domain protein {ECO:0000313|EMBL:CCY50628.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroi
SCNpilot_BF_INOC_scaffold_1532_15
unknown

Not on your lists

12060..12503
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_16
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12511..15018
DNA (2508bp) protein (836aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X559_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB55326.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
hypothetical protein
SCNpilot_BF_INOC_scaffold_1532_17
unknown

Not on your lists

15015..15263
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_18
unknown

Not on your lists

15260..15415
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_19
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15406..16038
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB55322.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
SCNpilot_BF_INOC_scaffold_1532_20
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16035..18446
DNA (2412bp) protein (804aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB55323.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
SCNpilot_BF_INOC_scaffold_1532_21
unknown

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18464..19402
DNA (939bp) protein (313aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_22
unknown

Not on your lists

19405..19566
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_23
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19792..20340
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C9KYX3_9BACE
DNA packaging protein
DNA packaging protein {ECO:0000313|EMBL:AII63194.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
SCNpilot_BF_INOC_scaffold_1532_24
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20482..20952
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X561_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04667.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
SCNpilot_BF_INOC_scaffold_1532_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21024..21308)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I992_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB59951.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
probable transcriptional regulator
SCNpilot_BF_INOC_scaffold_1532_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21476..21742
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2ASP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS18665.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldst
SCNpilot_BF_INOC_scaffold_1532_27
unknown

Not on your lists

21735..21875
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_28
unknown

Not on your lists

21888..22100
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_29
unknown

Not on your lists

22108..22407
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1532_30
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22434..22703
DNA (270bp) protein (90aa)
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:KKB59977.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;
Displaying items 1-30 of 32 in total

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