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SCNpilot_BF_INOC_scaffold_1562

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1562_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..636
DNA (636bp) protein (212aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IPQ6_9BACE
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CEA16175.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" so
SCNpilot_BF_INOC_scaffold_1562_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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668..1510
DNA (843bp) protein (281aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQF9_SPILD
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADB40740.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spir
SCNpilot_BF_INOC_scaffold_1562_3
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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1545..3047
DNA (1503bp) protein (501aa)
Uncharacterized protein id=3921893 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
DoxX family protein Tax=GWA2_Bacteroidetes_40_15_curated
putative membrane protein
SCNpilot_BF_INOC_scaffold_1562_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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3103..4206
DNA (1104bp) protein (368aa)
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Putative uncharacterized protein id=4324631 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_1562_5
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4353..5303
DNA (951bp) protein (317aa)
metallophosphoesterase n=1 Tax=Pedobacter agri RepID=UPI00029A399B
Metallophosphoesterase {ECO:0000313|EMBL:EOR94308.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
yvnB; metallophosphoesterase
SCNpilot_BF_INOC_scaffold_1562_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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5314..6411
DNA (1098bp) protein (366aa)
Putative uncharacterized protein id=4324631 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1562_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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6520..8028
DNA (1509bp) protein (503aa)
Uncharacterized protein id=1881784 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
coagulation factor 5/8 type domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
endopolygalacturonase
SCNpilot_BF_INOC_scaffold_1562_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8066..10000
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16224.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae
hypothetical protein
SCNpilot_BF_INOC_scaffold_1562_9
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10015..11889
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036FA7A0
Uncharacterized protein {ECO:0000313|EMBL:CDC99177.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
hypothetical protein
SCNpilot_BF_INOC_scaffold_1562_10
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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12195..14777
DNA (2583bp) protein (861aa)
Glycoside hydrolase family 2 sugar binding protein id=2741094 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
glycoside hydrolase Tax=GWA2_Bacteroidetes_40_15_curated
glycoside hydrolase
SCNpilot_BF_INOC_scaffold_1562_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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14832..15914
DNA (1083bp) protein (361aa)
Putative uncharacterized protein id=1881781 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1562_12
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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15947..17173
DNA (1227bp) protein (409aa)
Putative lipoprotein id=4567659 bin=GWC2_Bacteroidetes_40_22 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
putative lipoprotein Tax=GWA2_Bacteroidetes_40_15_curated
putative lipoprotein
SCNpilot_BF_INOC_scaffold_1562_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(17775..19247)
DNA (1473bp) protein (491aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobac
L-fucose isomerase-like protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J628_CYCMS
L-fucose isomerase-like protein
SCNpilot_BF_INOC_scaffold_1562_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(19240..20523)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein id=4541367 bin=GWA2_Bacteroidetes_42_15 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
major facilitator superfamily protein Tax=GWE2_Bacteroidetes_42_39_curated
major facilitator superfamily protein
SCNpilot_BF_INOC_scaffold_1562_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20637..21395
DNA (759bp) protein (253aa)
Transcriptional regulator, GntR family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5P4_9PORP
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEC98274.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabact
transcriptional regulator
Displaying 15 items

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