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SCNpilot_BF_INOC_scaffold_1659

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1659_1
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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852..2207
-----------------
DNA (1356bp)
protein (452aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AJ62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB54260.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
succinyl-diaminopimelate desuccinylase
SCNpilot_BF_INOC_scaffold_1659_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2234..3547
-----------------
DNA (1314bp)
protein (438aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AMB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB53798.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
Superfamily II DNA and RNA helicases
SCNpilot_BF_INOC_scaffold_1659_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3554..4810
-----------------
DNA (1257bp)
protein (419aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=2 Tax=Parabacteroides RepID=N2AT20_9PORP
chlorohydrolase
SCNpilot_BF_INOC_scaffold_1659_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4874..5737
-----------------
DNA (864bp)
protein (288aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=563193 species="Bac
purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Parabacteroides sp. D13 RepID=C7X837_9PORP
SCNpilot_BF_INOC_scaffold_1659_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5771..6541
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A9V6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12458.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnson
Tat pathway signal sequence domain-containing protein
SCNpilot_BF_INOC_scaffold_1659_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7209..7448
-----------------
DNA (240bp)
protein (80aa)
50S ribosomal protein L28 n=8 Tax=Parabacteroides RepID=A7AEM9_9PORP
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" s
rpmB; 50S ribosomal protein L28
SCNpilot_BF_INOC_scaffold_1659_7
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7466..7654
-----------------
DNA (189bp)
protein (63aa)
50S ribosomal protein L33 n=2 Tax=Porphyromonas RepID=S4NEX0_9PORP
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1305618 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cans
hypothetical protein
SCNpilot_BF_INOC_scaffold_1659_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7670..7822
-----------------
DNA (153bp)
protein (51aa)
Uncharacterized protein n=18 Tax=Bacteroidales RepID=A7AEM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15950.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae
hypothetical protein
SCNpilot_BF_INOC_scaffold_1659_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7985..9109
-----------------
DNA (1125bp)
protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=411477 species="Bacter
DNA polymerase III subunit beta n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWU8_9PORP
DNA polymerase III subunit beta
SCNpilot_BF_INOC_scaffold_1659_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9120..9890
-----------------
DNA (771bp)
protein (257aa)
Exonuclease, DNA polymerase III, epsilon subunit family n=3 Tax=Parabacteroides RepID=A7AEM4_9PORP
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CDD14029.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; en
DNA polymerase III subunit epsilon
SCNpilot_BF_INOC_scaffold_1659_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9946..11148
-----------------
DNA (1203bp)
protein (401aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=2 Tax=Parabacteroides RepID=N2ALL6_9PORP
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EOS19004.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadac
flavoprotein
SCNpilot_BF_INOC_scaffold_1659_12
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11186..12082
-----------------
DNA (897bp)
protein (299aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEM1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB51325.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
hypothetical protein
SCNpilot_BF_INOC_scaffold_1659_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12089..13510
-----------------
DNA (1422bp)
protein (474aa)
DNA repair protein RecN n=2 Tax=Parabacteroides RepID=N2AWZ0_9PORP
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromo
DNA repair protein recN
SCNpilot_BF_INOC_scaffold_1659_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13480..13716
-----------------
DNA (237bp)
protein (79aa)
DNA repair protein RecN n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGM9_9PORP
DNA repair protein recN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidac
SCNpilot_BF_INOC_scaffold_1659_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13809..14756
-----------------
DNA (948bp)
protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Cysteine synthase A n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FM59_BACFG
cysK; putative cysteine synthase
SCNpilot_BF_INOC_scaffold_1659_16
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14866..15630)
-----------------
DNA (765bp)
protein (255aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXY3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01802.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
SCNpilot_BF_INOC_scaffold_1659_17
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(15736..16095)
-----------------
DNA (360bp)
protein (120aa)
CoA-binding protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4B760
hypothetical protein; K06929 Tax=CG_Bacteroid_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_1659_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16315..16785
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5ZGL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98000.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnson
SCNpilot_BF_INOC_scaffold_1659_19
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16845..17696)
-----------------
DNA (852bp)
protein (284aa)
NmrA family transcriptional regulator {ECO:0000313|EMBL:KJF45050.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconi
Male sterility domain protein id=1768599 bin=GWD2_Bacteroidales_45_23 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Male sterility domain-containing protein
SCNpilot_BF_INOC_scaffold_1659_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17940..18266
-----------------
DNA (327bp)
protein (109aa)
Transcriptional regulator, HxlR family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2H5_PALPW
transcriptional regulator, hxlr family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADQ78919.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacte
SCNpilot_BF_INOC_scaffold_1659_21
unknown

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comp(18297..18653)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1659_22
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18771..19280
-----------------
DNA (510bp)
protein (170aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U2_PALPW
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AHW58864.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orien
SCNpilot_BF_INOC_scaffold_1659_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19354..20355)
-----------------
DNA (1002bp)
protein (334aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
malate dehydrogenase n=1 Tax=Alistipes senegalensis RepID=UPI0003155B88
Uncharacterized protein {ECO:0000313|EMBL:CCZ74095.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
SCNpilot_BF_INOC_scaffold_1659_24
Prevotella marshii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20683..22377
-----------------
DNA (1695bp)
protein (565aa)
Glutamate formimidoyltransferase {ECO:0000313|EMBL:EFM01720.1}; EC=2.1.2.5 {ECO:0000313|EMBL:EFM01720.1};; TaxID=862515 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Pr
ftcD; glutamate formimidoyltransferase (EC:2.1.2.5)
Glutamate formimidoyltransferase n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NT59_9BACT
SCNpilot_BF_INOC_scaffold_1659_25
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23821..24339
-----------------
DNA (519bp)
protein (173aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Alistipes sp. CAG:268 RepID=R6X064_9BACT
SCNpilot_BF_INOC_scaffold_1659_26
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24358..25857
-----------------
DNA (1500bp)
protein (500aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1262692 species="Bacteria; Bac
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Alistipes sp. CAG:157 RepID=R5X1F9_9BACT
SCNpilot_BF_INOC_scaffold_1659_27
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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25854..27284
-----------------
DNA (1431bp)
protein (477aa)
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] Tax=GWA2_Bacteroidetes_31_9_curated
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase id=5035143 bin=GWA2_Bacteroidetes_33_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_1659_28
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27989..30475)
-----------------
DNA (2487bp)
protein (829aa)
Alpha amylase, catalytic domain protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQ57_TANFA
alpha amylase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:AEW21359.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella f
SCNpilot_BF_INOC_scaffold_1659_29
Nonlabens sediminis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(30568..31716)
-----------------
DNA (1149bp)
protein (383aa)
Hypothetical lipoprotein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FK33_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:GAK97827.1}; TaxID=319236 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens sediminis.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1659_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31752..33371)
-----------------
DNA (1620bp)
protein (540aa)
SusD family protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V0X5_BACUN
SusD family protein {ECO:0000313|EMBL:EDO55123.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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