ggKbase home page

SCNpilot_BF_INOC_scaffold_296

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_296_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2..1372)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361FFA2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_296_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1369..2091)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376C93D
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_296_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2048..3310)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EEF45
group 1 glycosyl transferase Tax=GWC2_Bacteroidetes_46_850_curated
group 1 glycosyl transferase
SCNpilot_BF_INOC_scaffold_296_4
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3636..4277)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E398_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU90221.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12
SCNpilot_BF_INOC_scaffold_296_5

Not on your lists

4500..5339
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036155D6
Uncharacterized protein {ECO:0000313|EMBL:EJX11205.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_296_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5341..6117
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F1678
Uncharacterized protein {ECO:0000313|EMBL:CDD25193.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase
SCNpilot_BF_INOC_scaffold_296_7

Not on your lists

6123..7166
DNA (1044bp) protein (348aa)
shikimate 5-dehydrogenase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003726C88
Sialic acid synthase {ECO:0000313|EMBL:EJX11207.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
shikimate 5-dehydrogenase
SCNpilot_BF_INOC_scaffold_296_8
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7248..7775
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363AF93
Uncharacterized protein {ECO:0000313|EMBL:CCX63203.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
SCNpilot_BF_INOC_scaffold_296_9
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7901..8770
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QU22_CYAP0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK64397.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synec
SCNpilot_BF_INOC_scaffold_296_10
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8822..10276)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036237CA
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CCY38835.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Ta
capsular polysaccharide repeat unit transporter
SCNpilot_BF_INOC_scaffold_296_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10320..11144)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003667FD0
metallo-beta-lactamase superfamily hydrolase Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_296_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11147..13354)
DNA (2208bp) protein (736aa)
ptpA; Prolyl tripeptidyl peptidase (EC:3.4.14.12) rbh
Prolyl tripeptidyl peptidase {ECO:0000313|EMBL:CEA16836.1}; EC=3.4.14.12 {ECO:0000313|EMBL:CEA16836.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J0E0_9PORP
SCNpilot_BF_INOC_scaffold_296_13
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13413..14363)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003735695
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16835.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_296_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14668..15942
DNA (1275bp) protein (425aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=GWC2_Bacteroidetes_46_850_curated
purD; Phosphoribosylamine-glycine ligase (EC:6.3.4.13)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003709791
SCNpilot_BF_INOC_scaffold_296_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15958..16977
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368F83B
putative membrane protein rbh
Putative membrane protein {ECO:0000313|EMBL:CEA16833.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_296_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17061..17579
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E71BB
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
putative secreted protein
SCNpilot_BF_INOC_scaffold_296_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17656..19284)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D4878
alkaline phosphatase Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_296_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19370..20149
DNA (780bp) protein (260aa)
surE; stationary phase survival protein SurE (EC:3.1.3.2); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=GWC2_Bacteroidetes_46_850_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5) rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374C6C5
SCNpilot_BF_INOC_scaffold_296_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20151..21293
DNA (1143bp) protein (381aa)
glycosyltransferase family lipid-alpha-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036ED85D
lipid-A-disaccharide synthetase rbh
SCNpilot_BF_INOC_scaffold_296_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21330..22343
DNA (1014bp) protein (338aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=GWC2_Bacteroidetes_46_850_curated
pfkA3; 6-phosphofructokinase 3 (EC:2.7.1.11)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C1E95
SCNpilot_BF_INOC_scaffold_296_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22351..23151)
DNA (801bp) protein (267aa)
ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] Tax=GWC2_Bacteroidetes_46_850_curated
rnc; Ribonuclease 3 (EC:3.1.26.3) rbh
Ribonuclease 3 id=3870198 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_296_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23153..24415)
DNA (1263bp) protein (421aa)
fabF; beta-ketoacyl-acyl-carrier-protein synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWC2_Bacteroidetes_46_850_curated
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-ACP synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003814487
SCNpilot_BF_INOC_scaffold_296_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24426..24662)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003697165
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_296_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24773..25390
DNA (618bp) protein (206aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2) Tax=GWC2_Bacteroidetes_46_850_curated
purN; putative phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DA064
SCNpilot_BF_INOC_scaffold_296_25
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25410..27374)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IT49_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99842.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
alkaline phosphatase
SCNpilot_BF_INOC_scaffold_296_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27361..29001)
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3D7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05564.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
SusD family protein
SCNpilot_BF_INOC_scaffold_296_27
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29074..32496)
DNA (3423bp) protein (1141aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X3D6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05563.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
TonB-linked outer membrane protein, SusC/RagA family rbh
SCNpilot_BF_INOC_scaffold_296_28
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32678..33655)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IT54_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99847.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
anti-sigma factor
SCNpilot_BF_INOC_scaffold_296_29
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33790..34380)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IT55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99848.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
RNA polymerase ECF-type sigma factor
SCNpilot_BF_INOC_scaffold_296_30
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35158..36927
DNA (1770bp) protein (590aa)
Helix-turn-helix domain-containing protein AraC type n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KZ21_9BACE
Helix-turn-helix domain-containing protein AraC type {ECO:0000313|EMBL:CDE80973.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environment
AraC family transcriptional regulator
Displaying items 1-30 of 50 in total

View Taxonomy