ggKbase home page

SCNpilot_BF_INOC_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_324_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..314
-----------------
DNA (312bp)
protein (104aa)
bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E1948
bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase
SCNpilot_BF_INOC_scaffold_324_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(569..1870)
-----------------
DNA (1302bp)
protein (434aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367C6D1
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1983..3647)
-----------------
DNA (1665bp)
protein (555aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381E94C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15088.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_324_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3709..5130)
-----------------
DNA (1422bp)
protein (474aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377883B
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CEA15088.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_324_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5160..5522)
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038109C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15087.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_324_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5667..6746)
-----------------
DNA (1080bp)
protein (360aa)
serC; Phosphoserine aminotransferase (EC:2.6.1.52) rbh
MFS transporter n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003755E90
MFS transporter Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_324_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6846..7826)
-----------------
DNA (981bp)
protein (327aa)
Phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380B6B6
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_324_8
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8018..8650
-----------------
DNA (633bp)
protein (211aa)
recombinase RecR n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003704B35
recR; Recombination protein RecR rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassifie
SCNpilot_BF_INOC_scaffold_324_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8647..9240
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003793BCE
hypothetical protein
hypothetical protein AtheD1_12853 Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_324_10
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9218..9745
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003778057
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:CEA15082.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="
SCNpilot_BF_INOC_scaffold_324_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9774..10337
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382E068
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10349..12133
-----------------
DNA (1785bp)
protein (595aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C3D0C
chloride channel protein; K03281 chloride channel protein, CIC family Tax=GWC2_Bacteroidetes_46_850_curated
putative chloride channel protein
SCNpilot_BF_INOC_scaffold_324_13
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12226..13200
-----------------
DNA (975bp)
protein (325aa)
fmt; Methionyl-tRNA formyltransferase (EC:2.1.2.9) rbh
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1562970 species="
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038240DC
SCNpilot_BF_INOC_scaffold_324_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13203..14795)
-----------------
DNA (1593bp)
protein (531aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000364057F
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15092..15673
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369B011
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15077.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_324_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15754..16176
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003721FE3
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16154..16957
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036FEEF7
hypothetical protein; K06872 uncharacterized protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_324_18
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16959..17873
-----------------
DNA (915bp)
protein (305aa)
miaA1-1; tRNA dimethylallyltransferase 1 (EC:2.5.1.75) rbh
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003736FFD
SCNpilot_BF_INOC_scaffold_324_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18037..19194
-----------------
DNA (1158bp)
protein (386aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=GWC2_Bacteroidetes_46_850_curated
lysA; Diaminopimelate decarboxylase (EC:4.1.1.20)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BFD2D
SCNpilot_BF_INOC_scaffold_324_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19198..20358
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DA43F
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_324_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20583..22208
-----------------
DNA (1626bp)
protein (542aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B36EA
serine protease Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22413..23273
-----------------
DNA (861bp)
protein (287aa)
RNA polymerase sigma factor rpoD n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C197E
RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=GWC2_Bacteroidetes_46_850_curated
rpoD; RNA polymerase sigma factor RpoD
SCNpilot_BF_INOC_scaffold_324_23
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23553..24704
-----------------
DNA (1152bp)
protein (384aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036A191E
Outer membrane protein 40
Outer membrane protein 40 {ECO:0000313|EMBL:CEA15067.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_324_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25009..27477)
-----------------
DNA (2469bp)
protein (823aa)
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003659D49
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27534..28508)
-----------------
DNA (975bp)
protein (325aa)
Putative uncharacterized protein id=3928937 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
GSCFA family. Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_324_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29017..30210)
-----------------
DNA (1194bp)
protein (398aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A079F
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30298..30837)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FD393
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30864..31436)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D5F70
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_324_29
unknown

Not on your lists

31534..31779
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_324_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31837..32304
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003768465
hypothetical protein; K09748 ribosome maturation factor RimP Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
Displaying items 1-30 of 144 in total

View Taxonomy