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SCNpilot_BF_INOC_scaffold_600

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_600_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..836)
DNA (834bp) protein (278aa)
ABC transporter, ATP-binding protein n=5 Tax=Bacteroidales RepID=C7XCU8_9PORP
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKN29856.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25
SCNpilot_BF_INOC_scaffold_600_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1157..2515
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AP30_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47719.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
hypothetical protein
SCNpilot_BF_INOC_scaffold_600_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2578..4167
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZAK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08220.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
hypothetical protein
SCNpilot_BF_INOC_scaffold_600_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4366..4959
DNA (594bp) protein (198aa)
Sigma-70 region 2 n=2 Tax=Bacteroidales RepID=D0TJ85_9BACE
RNA polymerase ECF-type sigma factor
Sigma-70 region 2 {ECO:0000313|EMBL:EEY81781.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
SCNpilot_BF_INOC_scaffold_600_5
unknown

Not on your lists

5039..5218
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_600_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5259..5909
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
Ribulose-phosphate 3-epimerase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJ87_9BACE
ribulose-phosphate 3-epimerase
SCNpilot_BF_INOC_scaffold_600_7
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5916..7508
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YS76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50693.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
competence protein
SCNpilot_BF_INOC_scaffold_600_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7546..8595
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZQZ9_9PORP
DHHA1 domain protein {ECO:0000313|EMBL:EEC97462.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii
exopolyphosphatase-like protein
SCNpilot_BF_INOC_scaffold_600_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8675..9244
DNA (570bp) protein (190aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LCN0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN25865.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distaso
SCNpilot_BF_INOC_scaffold_600_10
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9254..10642
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase n=1 Tax=Parabacteroides sp. D25 RepID=K5ZYH5_9PORP
Phosphoglucosamine mutase {ECO:0000313|EMBL:KKB50696.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp.
phosphoglucomutase
SCNpilot_BF_INOC_scaffold_600_11
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10716..11216)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZQZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78681.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
NTP pyrophosphohydrolase
SCNpilot_BF_INOC_scaffold_600_12
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11493..11918
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU04_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99137.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_BF_INOC_scaffold_600_13
unknown

Not on your lists

12188..13042
DNA (855bp) protein (285aa)
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_600_14
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13111..13623)
DNA (513bp) protein (171aa)
Flavodoxin n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A860_9PORP
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
flavodoxin 1
SCNpilot_BF_INOC_scaffold_600_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13779..14603)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZXC4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31657.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25
transmembrane protein and transcriptional regulator
SCNpilot_BF_INOC_scaffold_600_16
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14619..15374)
DNA (756bp) protein (252aa)
Uncharacterized protein id=4655922 bin=GWF2_Bacteroidetes_40_14 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_40_14_curated
putative transmembrane protein
SCNpilot_BF_INOC_scaffold_600_17
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15668..16396
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B035_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS19841.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldst
short-chain dehydrogenase/reductase SDR
SCNpilot_BF_INOC_scaffold_600_18
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16603..17445
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
5-keto 4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UQV3_9PORP
SCNpilot_BF_INOC_scaffold_600_19
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17458..18903
DNA (1446bp) protein (482aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYJ4_PEDHD
Hexuronate transporter {ECO:0000313|EMBL:GAK35902.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM
major facilitator superfamily protein
SCNpilot_BF_INOC_scaffold_600_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18919..19713
DNA (795bp) protein (265aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=3 Tax=Parabacteroides RepID=A7AJS4_9PORP
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDD14687.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabac
SCNpilot_BF_INOC_scaffold_600_21
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19721..20863
DNA (1143bp) protein (381aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B897_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB54117.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
hypothetical protein
SCNpilot_BF_INOC_scaffold_600_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21012..22049
DNA (1038bp) protein (346aa)
GumN protein n=2 Tax=Bacteroides caccae RepID=A5ZG59_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23091.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;
GumN protein
SCNpilot_BF_INOC_scaffold_600_23
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22626..23246
DNA (621bp) protein (207aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Bacteroides sp. D22 RepID=D7J4X0_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EEO52702.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
SCNpilot_BF_INOC_scaffold_600_24
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23370..24356
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EIF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU88895.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12
Fe2+-dicitrate sensor, membrane component
SCNpilot_BF_INOC_scaffold_600_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24401..27919
DNA (3519bp) protein (1173aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZK71_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21110.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
membrane protein
SCNpilot_BF_INOC_scaffold_600_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27936..29297
DNA (1362bp) protein (454aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9A1D3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82901.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C3
carbohydrate-binding protein SusD
SCNpilot_BF_INOC_scaffold_600_27
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29361..30272
DNA (912bp) protein (304aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5C8_PEDSD
glycerophosphoryl diester phosphodiesterase rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ADY52073.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;"
SCNpilot_BF_INOC_scaffold_600_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30283..31611
DNA (1329bp) protein (443aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=D4WCB6_BACOV
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFF53876.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroid
Sugar phosphate permease
SCNpilot_BF_INOC_scaffold_600_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31776..33749)
DNA (1974bp) protein (658aa)
Glycoside hydrolase family 20 n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IP82_9PORP
Glycoside hydrolase family 20 {ECO:0000313|EMBL:CDB48274.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" s
glycoside hydrolase
SCNpilot_BF_INOC_scaffold_600_30
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33984..38072
DNA (4089bp) protein (1363aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3RFI0_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EEO47789.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
histidine kinase
Displaying items 1-30 of 40 in total

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