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SCNpilot_BF_INOC_scaffold_1643_26

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: 25934..26530

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZL36_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 194.0
  • Bit_score: 215
  • Evalue 3.80e-53
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB60528.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 221
  • Evalue 9.80e-55
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 168.0
  • Bit_score: 119
  • Evalue 1.40e-24

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Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGAGTGCTTTGTTTGATCATACTATGATAAAAATCGGCATAGAGAACAGGGAGGGGTTTGACAACCTGTTCCGACACTATTATCCTCGCTTGAAATCGTACGTTTCGTCGTTTGTAGAAGATTCGGTAGCGGAAGACATTACACAGGACGTTTTTCTATATGTTTGGGAAAACAGAAAAAAAATCCATGTTGGTCCGGCTTTCCATTCCTATCTGTTTCAAGCGGGTTATACAAGATCGATCGACTACCTTAAGAGACAAAAATCCGTTACCGGATTCTCATCGCTTATCCAGAATGAAATTACGCAGATTTACGAAACGCTGGCTGTTAATGAGGGTGATATACTTGAAAATCTGTATTCGGAGGACTTCTATGAGAAACTATATACCTTGTTGGAGCTGATTCCAGAACAGCGACGCAATGTTTTTCTGATGGCCTATATGGACGGATTAAAGACGAAGGAGATTGCCGCCAACCTGGATATCCCGCAACGCACGGTTGAAAGTCACATTTACCTTACCCTTAAATTTCTGAAAGAACACTTCGAGAAAAAAGATTTCTTCCTGCTTTTGCTGTTAATTCAGTTTTCTATCTAA
PROTEIN sequence
Length: 199
MSALFDHTMIKIGIENREGFDNLFRHYYPRLKSYVSSFVEDSVAEDITQDVFLYVWENRKKIHVGPAFHSYLFQAGYTRSIDYLKRQKSVTGFSSLIQNEITQIYETLAVNEGDILENLYSEDFYEKLYTLLELIPEQRRNVFLMAYMDGLKTKEIAANLDIPQRTVESHIYLTLKFLKEHFEKKDFFLLLLLIQFSI*