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SCNpilot_BF_INOC_scaffold_1643

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1643_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..695)
DNA (693bp) protein (231aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEC96480.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEC96480.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Pa
Aminotransferase, class I/II n=2 Tax=Parabacteroides johnsonii RepID=B7BAR9_9PORP
aspartate aminotransferase
SCNpilot_BF_INOC_scaffold_1643_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(963..1103)
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X313_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05491.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
SCNpilot_BF_INOC_scaffold_1643_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1100..2029)
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X314_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05492.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
Predicted transcriptional regulator rbh
SCNpilot_BF_INOC_scaffold_1643_4
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2039..2461)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXE9_9PORP
PhnB protein
PhnB protein {ECO:0000313|EMBL:CDN30826.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
SCNpilot_BF_INOC_scaffold_1643_5
unknown

Not on your lists

comp(2521..2745)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1643_6
unknown

Not on your lists

comp(3091..3609)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1643_7
unknown

Not on your lists

4368..4766
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1643_8
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4739..5290)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RRN6_LEAB4
Uncharacterized protein {ECO:0000313|EMBL:KFF12918.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_1643_9
GWA1_OD1_54_10, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5356..5865)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D6431
Uncharacterized protein {ECO:0000313|EMBL:KKW35649.1}; TaxID=1618605 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWA1_54_10.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1643_10
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6379..7257)
DNA (879bp) protein (293aa)
yhhW_3; Quercetin 2,3-dioxygenase (EC:1.13.11.24)
Short-chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Bacteroides sp. CAG:462 RepID=R7CU94_9BACE
Short-chain dehydrogenase {ECO:0000313|EMBL:KGN97266.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivica
SCNpilot_BF_INOC_scaffold_1643_11
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7400..7624)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PLE0_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM72197.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis
SCNpilot_BF_INOC_scaffold_1643_12
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7775..10024)
DNA (2250bp) protein (750aa)
alpha-1,3/4-fucosidase (EC:3.2.1.51)
F5/8 type C domain protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RCW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB52040.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
SCNpilot_BF_INOC_scaffold_1643_13
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10065..10262)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9ID69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS16156.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV
alpha-galactosidase
SCNpilot_BF_INOC_scaffold_1643_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10664..11218
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides merdae RepID=A7A9Z4_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN88451.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides
RNA polymerase ECF-type sigma factor
SCNpilot_BF_INOC_scaffold_1643_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11294..12289
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AUJ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17573.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldst
anti-sigma factor
SCNpilot_BF_INOC_scaffold_1643_16
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12454..15807
DNA (3354bp) protein (1118aa)
TonB-dependent receptor plug n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QTW3_SPILD
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB57928.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so
TonB-dependent receptor plug
SCNpilot_BF_INOC_scaffold_1643_17
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15835..16467
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FD28C
Uncharacterized protein {ECO:0000313|EMBL:KKB57929.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
RagB/SusD domain-containing protein
SCNpilot_BF_INOC_scaffold_1643_18
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16430..17416
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FD28C
Uncharacterized protein {ECO:0000313|EMBL:KKB57929.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
RagB/SusD domain-containing protein
SCNpilot_BF_INOC_scaffold_1643_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17440..19077
DNA (1638bp) protein (546aa)
Arylsulfatase {ECO:0000313|EMBL:EDO53053.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDO53053.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source
Arylsulfatase n=2 Tax=Bacteroides RepID=A7V655_BACUN
arylsulfatase
SCNpilot_BF_INOC_scaffold_1643_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19081..20022)
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YFS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78940.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
hypothetical protein
SCNpilot_BF_INOC_scaffold_1643_21
unknown

Not on your lists

comp(20001..20114)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1643_22
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20663..23254
DNA (2592bp) protein (864aa)
Chaperone ClpB n=2 Tax=Parabacteroides RepID=N2BIS0_9PORP
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. H
endopeptidase Clp ATP-binding subunit B
SCNpilot_BF_INOC_scaffold_1643_23
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23360..23689
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZKY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB60464.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
hypothetical protein
SCNpilot_BF_INOC_scaffold_1643_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23754..24428
DNA (675bp) protein (225aa)
OmpA family protein n=4 Tax=Parabacteroides RepID=B7B7N6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05871.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnson
OmpA family outer membrane protein
SCNpilot_BF_INOC_scaffold_1643_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24528..25775
DNA (1248bp) protein (416aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BDX4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS18238.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldst
hypothetical protein
SCNpilot_BF_INOC_scaffold_1643_26
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25934..26530
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZL36_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB60528.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides
RNA polymerase sigma-70 factor
SCNpilot_BF_INOC_scaffold_1643_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26595..27563
DNA (969bp) protein (323aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides RepID=B7B7S5_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEC97523.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sourc
putative anti-sigma factor
SCNpilot_BF_INOC_scaffold_1643_28
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27692..31231
DNA (3540bp) protein (1180aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G552_ECHVK
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AGA80131.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echin
SCNpilot_BF_INOC_scaffold_1643_29
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31243..33015
DNA (1773bp) protein (591aa)
RagB/SusD domain-containing protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2S2_SPHS2
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADZ80984.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source=
SCNpilot_BF_INOC_scaffold_1643_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33322..34578
DNA (1257bp) protein (419aa)
Tat pathway signal sequence domain protein n=3 Tax=Bacteroidales RepID=D0TC39_9BACE
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFK62373.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Para
NADH-dependent dehydrogenase
Displaying items 1-30 of 32 in total

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