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SCNpilot_BF_INOC_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_199_1
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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250..447
-----------------
DNA (198bp)
protein (66aa)
Putative uncharacterized protein id=3867998 bin=GWF2_Bacteroidetes_43_11 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_199_2
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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497..2815
-----------------
DNA (2319bp)
protein (773aa)
TonB-dependent receptor id=3853758 bin=GWF2_Bacteroidetes_38_335 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
tonb-dependent receptor Tax=GWF2_Bacteroidetes_38_335_curated
tonb-dependent receptor
SCNpilot_BF_INOC_scaffold_199_3
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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2827..3648
-----------------
DNA (822bp)
protein (274aa)
Putative uncharacterized protein id=3853755 bin=GWF2_Bacteroidetes_38_335 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_199_4
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3890..4432
-----------------
DNA (543bp)
protein (181aa)
MscS Mechanosensitive ion channel n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZUJ4_9BACE
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EGJ71159.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis
hypothetical protein
SCNpilot_BF_INOC_scaffold_199_5

Not on your lists

comp(4436..6337)
-----------------
DNA (1902bp)
protein (634aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XC78_CELAD
Uncharacterized protein {ECO:0000313|EMBL:KKO00164.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
gaf sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_199_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6616..8874
-----------------
DNA (2259bp)
protein (753aa)
aconitase (EC:4.2.1.3)
Aconitase {ECO:0000313|EMBL:ADQ79190.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ADQ79190.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" sourc
Aconitase id=2058389 bin=GWE2_Gammaproteobacteria_37_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
SCNpilot_BF_INOC_scaffold_199_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9065..10426
-----------------
DNA (1362bp)
protein (454aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1] Tax=CG_Paludi_01
Citrate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T397_PALPW
citrate synthase
SCNpilot_BF_INOC_scaffold_199_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10434..11657
-----------------
DNA (1224bp)
protein (408aa)
isocitrate dehydrogenase (nadp) (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=CG_Paludi_01
icd1; Isocitrate dehydrogenase [NADP] (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] id=4755858 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_199_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12050..13999
-----------------
DNA (1950bp)
protein (650aa)
Amylo-alpha-16-glucosidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T088_PALPW
amylO-alpha-16-glucosidase
Amylo-alpha-16-glucosidase {ECO:0000313|EMBL:ADQ78278.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionici
SCNpilot_BF_INOC_scaffold_199_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14001..15257
-----------------
DNA (1257bp)
protein (419aa)
(1->4)-alpha-D-glucan synthase (ADP-glucose) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T087_PALPW
(1->4)-alpha-d-glucan synthase Tax=CG_Paludi_01
(1->4)-alpha-d-glucan synthase
SCNpilot_BF_INOC_scaffold_199_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15316..16608
-----------------
DNA (1293bp)
protein (431aa)
ATP synthase F1 subcomplex epsilon subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T086_PALPW
ATP synthase F1 subunit epsilon
ATP synthase F1 subcomplex epsilon subunit {ECO:0000313|EMBL:ADQ78276.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_199_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16688..18097
-----------------
DNA (1410bp)
protein (470aa)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T082_PALPW
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:ADQ78272.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludi
SCNpilot_BF_INOC_scaffold_199_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18140..18910)
-----------------
DNA (771bp)
protein (257aa)
5'-nucleotidase (EC:3.1.3.5 3.1.3.6 3.6.1.11); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=CG_Paludi_01
5'-nucleotidase (EC:3.1.3.5 3.1.3.6 3.6.1.11)
5'-nucleotidase SurE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8P6_PALPW
SCNpilot_BF_INOC_scaffold_199_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18915..19643)
-----------------
DNA (729bp)
protein (243aa)
Protein involved in gliding motility GldF n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8P5_PALPW
gliding motility protein gldf
Protein involved in gliding motility GldF {ECO:0000313|EMBL:ADQ81154.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludiba
SCNpilot_BF_INOC_scaffold_199_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19692..20432)
-----------------
DNA (741bp)
protein (247aa)
Metallophosphoesterase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X4_PALPW
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADQ79418.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigene
SCNpilot_BF_INOC_scaffold_199_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20453..20785)
-----------------
DNA (333bp)
protein (111aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79419.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_199_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20877..21275)
-----------------
DNA (399bp)
protein (133aa)
Thioesterase superfamily protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X6_PALPW
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADQ79420.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter prop
SCNpilot_BF_INOC_scaffold_199_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21278..21904)
-----------------
DNA (627bp)
protein (209aa)
O-methyltransferase family 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X7_PALPW
O-methyltransferase family protein
O-methyltransferase family 3 {ECO:0000313|EMBL:ADQ79421.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propioni
SCNpilot_BF_INOC_scaffold_199_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21904..23121)
-----------------
DNA (1218bp)
protein (406aa)
Peptidase M16 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X8_PALPW
peptidase m16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADQ79422.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propioni
SCNpilot_BF_INOC_scaffold_199_20
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23353..24171)
-----------------
DNA (819bp)
protein (273aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6R7L0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52179.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B8463
hypothetical protein
SCNpilot_BF_INOC_scaffold_199_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24485..26320)
-----------------
DNA (1836bp)
protein (612aa)
DNA topoisomerase iii (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludiba
DNA topoisomerase III n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X9_PALPW
SCNpilot_BF_INOC_scaffold_199_22
CG_Bacteroid_02, Bacteroidetes, Bacteria

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26464..27267
-----------------
DNA (804bp)
protein (268aa)
oxidoreductase FAD/NAD(P)-binding subunit; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=CG_Bacteroid_02
Oxidoreductase FAD/NAD(P)-binding domain protein id=3839915 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
oxidoreductase FAD/NAD(P)-binding subunit
SCNpilot_BF_INOC_scaffold_199_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27278..27670
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00035CAF17
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_199_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27678..29579
-----------------
DNA (1902bp)
protein (634aa)
nh(3)-dependent nad(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000313|EMBL:ADQ79425.1}; EC=6.3.1.5 {ECO:0000313|EMBL:ADQ79425.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadacea
NH(3)-dependent NAD(+) synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Y1_PALPW
SCNpilot_BF_INOC_scaffold_199_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29584..30189)
-----------------
DNA (606bp)
protein (202aa)
Translation factor SUA5 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3W8_PALPW
translation factor sua5
Translation factor SUA5 {ECO:0000313|EMBL:ADQ79412.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_199_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30191..31513)
-----------------
DNA (1323bp)
protein (441aa)
MATE efflux family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3V9_PALPW
mate efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADQ79403.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Palu
SCNpilot_BF_INOC_scaffold_199_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31722..37526
-----------------
DNA (5805bp)
protein (1935aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3W0_PALPW
alpha-2-macroglobulin domain-containing protein Tax=CG_Paludi_01
alpha-2-macroglobulin domain-containing protein
SCNpilot_BF_INOC_scaffold_199_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


37665..38687
-----------------
DNA (1023bp)
protein (341aa)
Protein RecA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0X7_PALPW
reca protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=694427 species="Bacteria; Bacteroid
SCNpilot_BF_INOC_scaffold_199_29
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38935..39798)
-----------------
DNA (864bp)
protein (288aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A0_PALPW
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=CG_Paludi_01
RNA polymerase, sigma 70 subunit, rpod subfamily
SCNpilot_BF_INOC_scaffold_199_30
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40008..41486)
-----------------
DNA (1479bp)
protein (493aa)
protease do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=CG_Paludi_01
protease do (EC:3.4.21.108)
Protease Do n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A1_PALPW
Displaying items 1-30 of 119 in total

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