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SCNpilot_BF_INOC_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_261_1
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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239..1000
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9QVI6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY33781.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL
two-component system response regulator
SCNpilot_BF_INOC_scaffold_261_2
unknown

Not on your lists

1244..1456
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_261_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1766..3709
-----------------
DNA (1944bp)
protein (648aa)
ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T148_PALPW
SCNpilot_BF_INOC_scaffold_261_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3720..4499
-----------------
DNA (780bp)
protein (260aa)
mazg family protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=CG_Paludi_01
MazG family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A6_PALPW
mazg family protein
SCNpilot_BF_INOC_scaffold_261_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4943..6970
-----------------
DNA (2028bp)
protein (676aa)
dipeptidyL-peptidase iii (EC:3.4.14.4); K01277 dipeptidyl-peptidase III [EC:3.4.14.4] Tax=CG_Paludi_01
dipeptidyl-peptidase iii (EC:3.4.14.4)
Dipeptidyl-peptidase III n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q3_PALPW
SCNpilot_BF_INOC_scaffold_261_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7096..7665)
-----------------
DNA (570bp)
protein (190aa)
dephosphoCoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=694427 species="Bacteria; Ba
Dephospho-CoA kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q9_PALPW
SCNpilot_BF_INOC_scaffold_261_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7788..9113)
-----------------
DNA (1326bp)
protein (442aa)
Ribonuclease BN n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T291_PALPW
ribonuclease bn
Ribonuclease BN {ECO:0000313|EMBL:ADQ78835.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (stra
SCNpilot_BF_INOC_scaffold_261_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9209..10084)
-----------------
DNA (876bp)
protein (292aa)
YicC-like domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T294_PALPW
yicc-like domain-containing protein
YicC-like domain-containing protein {ECO:0000313|EMBL:ADQ78838.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter p
SCNpilot_BF_INOC_scaffold_261_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10629..11993
-----------------
DNA (1365bp)
protein (455aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromon
Tryptophan synthase beta chain n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T293_PALPW
pyridoxal-phosphate dependent trpb-like enzyme rbh
SCNpilot_BF_INOC_scaffold_261_10
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(12033..12410)
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein; K09790 hypothetical protein Tax=RBG_13_Chloroflexi_52_14_curated
hypothetical protein; K09790 hypothetical protein id=1242595 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
SCNpilot_BF_INOC_scaffold_261_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12815..14293)
-----------------
DNA (1479bp)
protein (493aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae
Ketol-acid reductoisomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E3_PALPW
SCNpilot_BF_INOC_scaffold_261_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14336..14884)
-----------------
DNA (549bp)
protein (183aa)
acetolactate synthase small subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=CG_Paludi_01
acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit id=3076710 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
SCNpilot_BF_INOC_scaffold_261_13
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14921..16603)
-----------------
DNA (1683bp)
protein (561aa)
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWF2_Bacteroidetes_49_14_curated
acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit id=3076711 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
SCNpilot_BF_INOC_scaffold_261_14
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16848..18680)
-----------------
DNA (1833bp)
protein (611aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=GWF2_Bacteroidetes_49_14_curated
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0D9_PALPW
SCNpilot_BF_INOC_scaffold_261_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19022..20260)
-----------------
DNA (1239bp)
protein (413aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79212.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_261_16
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(20262..21437)
-----------------
DNA (1176bp)
protein (392aa)
aminotransferase class i and ii; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=GWF2_Bacteroidetes_49_14_curated
Aminotransferase class I and II n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3C0_PALPW
aminotransferase class i and ii
SCNpilot_BF_INOC_scaffold_261_17
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(21502..23979)
-----------------
DNA (2478bp)
protein (826aa)
tonb-dependent receptor plug Tax=GWF2_Bacteroidetes_49_14_curated
TonB-dependent receptor plug id=4071997 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
tonb-dependent receptor plug
SCNpilot_BF_INOC_scaffold_261_18
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24106..24978)
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein Tax=GWF2_Bacteroidetes_49_14_curated
Putative uncharacterized protein id=4071998 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
SCNpilot_BF_INOC_scaffold_261_19
Porphyromonas sp. CAG:1061, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(25072..28185)
-----------------
DNA (3114bp)
protein (1038aa)
acriflavin resistance protein n=1 Tax=Porphyromonas levii RepID=UPI00035E1CC9
Acriflavin resistance protein {ECO:0000313|EMBL:CCY09088.1}; TaxID=1262916 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; environmental samples.;" sou
acriflavin resistance protein
SCNpilot_BF_INOC_scaffold_261_20
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28211..29263)
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI000381B0A0
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEE12945.1}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porph
SCNpilot_BF_INOC_scaffold_261_21
Porphyromonas sp. CAG:1061, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29279..30664)
-----------------
DNA (1386bp)
protein (462aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI0003755A32
Outer membrane efflux protein {ECO:0000313|EMBL:CCY09090.1}; TaxID=1262916 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; environmental samples.;" sou
outer membrane efflux protein
SCNpilot_BF_INOC_scaffold_261_22
Porphyromonas uenonis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30815..31405)
-----------------
DNA (591bp)
protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Porphyromonas asaccharolytica PR426713P-I RepID=E4KRL2_9PORP
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEK17177.1}; TaxID=596327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromo
SCNpilot_BF_INOC_scaffold_261_23
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31715..32479
-----------------
DNA (765bp)
protein (255aa)
RNA methyltransferase, trmh family, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=GWF2_Bacteroidetes_49_14_curated
RNA methyltransferase, TrmH family, group 3 id=4071999 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
RNA methyltransferase, trmh family, group 3
SCNpilot_BF_INOC_scaffold_261_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32510..33187
-----------------
DNA (678bp)
protein (226aa)
ribosomal large subunit pseudouridine synthase d (EC:5.4.99.-)
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:ADQ78854.1}; EC=5.4.99.- {ECO:0000313|EMBL:ADQ78854.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; P
Ribosomal large subunit pseudouridine synthase D n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2B0_PALPW
SCNpilot_BF_INOC_scaffold_261_25
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(33198..34274)
-----------------
DNA (1077bp)
protein (359aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=742767 species="Bacteria; Bacteroidetes; Bact
DNA polymerase IV n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D8C9D0
DNA polymerase IV
SCNpilot_BF_INOC_scaffold_261_26
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(34531..34839)
-----------------
DNA (309bp)
protein (103aa)
id=2145295 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
id=2145295 Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_BF_INOC_scaffold_261_27
unknown

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comp(34912..35322)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_261_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35342..35692)
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JGH1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49217.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
SCNpilot_BF_INOC_scaffold_261_29
unknown

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35855..36061
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_261_30
unknown

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36213..36503
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

Displaying items 1-30 of 70 in total

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