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SCNpilot_BF_INOC_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_338_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(237..2384)
DNA (2148bp) protein (716aa)
HRDC domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T239_PALPW
hrdc domain-containing protein
HRDC domain protein {ECO:0000313|EMBL:ADQ78783.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacte
SCNpilot_BF_INOC_scaffold_338_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2499..3731)
DNA (1233bp) protein (411aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3) Tax=CG_Paludi_01
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003612608
glutaconyl-CoA decarboxylase subunit beta
SCNpilot_BF_INOC_scaffold_338_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3743..4237)
DNA (495bp) protein (165aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1F7_PALPW
biotin/lipoyl attachment domaiN-containing protein Tax=CG_Paludi_01
biotin/lipoyl attachment domain-containing protein
SCNpilot_BF_INOC_scaffold_338_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4195..4548)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CEDD
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_338_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4567..6126)
DNA (1560bp) protein (520aa)
carboxyl transferase (EC:6.4.1.3) Tax=CG_Paludi_01
carboxyl transferase (EC:6.4.1.3)
Carboxyl transferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1F9_PALPW
SCNpilot_BF_INOC_scaffold_338_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6154..6561)
DNA (408bp) protein (136aa)
methylmalonyL-CoA epimerase (EC:5.1.99.1); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=CG_Paludi_01
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1G0_PALPW
SCNpilot_BF_INOC_scaffold_338_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6909..8801)
DNA (1893bp) protein (631aa)
hypothetical protein MsalJ2_14073 id=3951577 bin=GWC2_Bacteroidetes_46_850 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_338_8
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8855..9403)
DNA (549bp) protein (183aa)
putative transcriptional regulator Tax=GWB2_Bacteroidetes_41_8_curated
MerR family transcriptional regulator id=3951579 bin=GWC2_Bacteroidetes_46_850 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
MerR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_338_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9598..10662)
DNA (1065bp) protein (355aa)
nad-dependent epimerase/dehydratase (EC:5.1.3.12); K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] Tax=GWF2_RBX1_38_17_curated
NAD-dependent epimerase/dehydratase family protein id=1951166 bin=GWE2_RBX1_39_32 species=unknown genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NAD-dependent epimerase/dehydratase
SCNpilot_BF_INOC_scaffold_338_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10678..12024)
DNA (1347bp) protein (449aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADQ79123.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADQ79123.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
Nucleotide sugar dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T329_PALPW
SCNpilot_BF_INOC_scaffold_338_11
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12042..13172)
DNA (1131bp) protein (377aa)
aminotransferase DegT n=1 Tax=Bacteroides gallinarum RepID=UPI000369F782
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:CDB81641.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environment
aminotransferase DegT
SCNpilot_BF_INOC_scaffold_338_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13249..13812)
DNA (564bp) protein (188aa)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Bacteroides RepID=B0NP59_BACSE
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDS15860.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacter
Acetyltransferase
SCNpilot_BF_INOC_scaffold_338_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13986..15533)
DNA (1548bp) protein (516aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5C0_PALPW
SCNpilot_BF_INOC_scaffold_338_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15680..18424
DNA (2745bp) protein (915aa)
DNA topoisomerase IV subunit A {ECO:0000313|EMBL:ADQ79915.1}; EC=5.99.1.3 {ECO:0000313|EMBL:ADQ79915.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
DNA topoisomerase iv subunit a (EC:5.99.1.3)
DNA topoisomerase IV subunit A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5C1_PALPW
SCNpilot_BF_INOC_scaffold_338_15
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18433..22419)
DNA (3987bp) protein (1329aa)
Two-component system sensor histidine kinase/response regulator hybrid n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JXA2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW61499.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orie
SCNpilot_BF_INOC_scaffold_338_16
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22874..24181
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5D8_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL76674.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (
SCNpilot_BF_INOC_scaffold_338_17
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24487..27114
DNA (2628bp) protein (876aa)
Arylsulfatase n=2 Tax=Bacteroides RepID=A7V641_BACUN
Sulfatase {ECO:0000313|EMBL:EFV25818.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
N-sulfoglucosamine sulfohydrolase
SCNpilot_BF_INOC_scaffold_338_18
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27232..28251
DNA (1020bp) protein (340aa)
endo-1,4-beta-xylanase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000369D64B
1,4-beta-xylanase {ECO:0000313|EMBL:KJF45243.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK
1,4-beta-xylanase
SCNpilot_BF_INOC_scaffold_338_19
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28286..29386
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9TA24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY65668.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C
glycoside hydrolase
SCNpilot_BF_INOC_scaffold_338_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29587..30780)
DNA (1194bp) protein (398aa)
aminotransferase class i and ii (EC:2.6.1.1)
Aminotransferase class I and II {ECO:0000313|EMBL:ADQ80735.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ADQ80735.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
Aminotransferase class I and II n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P1_PALPW
SCNpilot_BF_INOC_scaffold_338_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30952..32184)
DNA (1233bp) protein (411aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogena
Gamma-glutamyl phosphate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T548_PALPW
SCNpilot_BF_INOC_scaffold_338_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32310..33386)
DNA (1077bp) protein (359aa)
glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=CG_Paludi_01
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T549_PALPW
SCNpilot_BF_INOC_scaffold_338_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33373..34350)
DNA (978bp) protein (326aa)
Peptidase M28 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T550_PALPW
peptidase m28
Peptidase M28 {ECO:0000313|EMBL:ADQ79844.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter prop
SCNpilot_BF_INOC_scaffold_338_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

34821..35018
DNA (198bp) protein (66aa)
HEPN domain protein id=5037735 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
HEPN domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
HEPN domain-containing protein
SCNpilot_BF_INOC_scaffold_338_25
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

35191..35493
DNA (303bp) protein (101aa)
DNA polymerase beta domain-containing protein Tax=CG_Bacteroid_01
Nucleotidyltransferase domain-containing protein id=4605781 bin=GWF2_Bacteroidetes_43_63 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
nucleotidyltransferase
SCNpilot_BF_INOC_scaffold_338_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35818..36690
DNA (873bp) protein (291aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T551_PALPW
electron transfer flavoprotein subunits alpha/beta
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ADQ79845.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="
SCNpilot_BF_INOC_scaffold_338_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36695..37714
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T552_PALPW
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADQ79846.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Palud
SCNpilot_BF_INOC_scaffold_338_28
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

37746..38030
DNA (285bp) protein (95aa)
ORF6N domain n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BN71_9FIRM
ORF6N domain {ECO:0000313|EMBL:CDD66588.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
kila-n, DNA-binding domain
SCNpilot_BF_INOC_scaffold_338_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38116..39825
DNA (1710bp) protein (570aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T553_PALPW
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADQ79847.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="P
SCNpilot_BF_INOC_scaffold_338_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39915..40838)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5N3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80027.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
Displaying items 1-30 of 46 in total

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