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SCNpilot_BF_INOC_scaffold_405

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_405_1
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

148..549
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FNJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB10526.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
SCNpilot_BF_INOC_scaffold_405_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(572..5014)
DNA (4443bp) protein (1481aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8I8_PALPW
Uncharacterized protein {ECO:0000313|EMBL:ADQ81032.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
hypothetical protein
SCNpilot_BF_INOC_scaffold_405_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5052..6083
DNA (1032bp) protein (344aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8I7_PALPW
SCNpilot_BF_INOC_scaffold_405_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6080..6661
DNA (582bp) protein (194aa)
Exosortase EpsH-related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8I6_PALPW
exosortase epsh-related protein
Exosortase EpsH-related protein {ECO:0000313|EMBL:ADQ81030.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propi
SCNpilot_BF_INOC_scaffold_405_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6736..7509
DNA (774bp) protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:ADQ80830.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ADQ80830.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Palud
Prephenate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Y6_PALPW
SCNpilot_BF_INOC_scaffold_405_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7543..7722
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Y5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80829.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_405_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7890..9170
DNA (1281bp) protein (427aa)
Transcriptional regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3N5_PALPW
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADQ79329.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicig
SCNpilot_BF_INOC_scaffold_405_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9157..9717
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3N4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79328.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_405_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9737..10405
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3N3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79327.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_405_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10414..10746
DNA (333bp) protein (111aa)
Protein translocase subunit secG n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3N2_PALPW
protein translocase subunit secg
Protein translocase subunit secG {ECO:0000313|EMBL:ADQ79326.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source
SCNpilot_BF_INOC_scaffold_405_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10783..11358
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3N0_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79324.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_405_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11369..12622
DNA (1254bp) protein (418aa)
CinA-like protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M9_PALPW
competence/damage-inducible protein cina
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes
SCNpilot_BF_INOC_scaffold_405_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


12727..12966
DNA (240bp) protein (80aa)
50S ribosomal protein L28 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M8_PALPW
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propion
SCNpilot_BF_INOC_scaffold_405_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


12986..13174
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M7_PALPW
ribosomal protein l33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propion
SCNpilot_BF_INOC_scaffold_405_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13184..13336
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79320.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_405_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13481..14431
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M5_PALPW
signal recognition particle-docking protein ftsy
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroi
SCNpilot_BF_INOC_scaffold_405_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14428..15723
DNA (1296bp) protein (432aa)
30S ribosomal protein s12p methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M4_PALPW
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
SCNpilot_BF_INOC_scaffold_405_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15846..16136
DNA (291bp) protein (97aa)
Histone family protein DNA-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M3_PALPW
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADQ79317.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_405_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16129..17388
DNA (1260bp) protein (420aa)
Histone family protein DNA-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3M2_PALPW
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADQ79316.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_405_20
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17511..18449
DNA (939bp) protein (313aa)
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
Uncharacterized protein id=4342203 bin=GWF2_Bacteroidetes_43_63 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
SCNpilot_BF_INOC_scaffold_405_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18683..19123
DNA (441bp) protein (147aa)
Heat shock protein Hsp20 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E2_PALPW
heat shock protein hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ADQ80286.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicige
SCNpilot_BF_INOC_scaffold_405_22
Capnocytophaga ochracea, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19557..21134
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M638_CAPOD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU91915.1}; Flags: Precursor;; TaxID=521097 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="
SCNpilot_BF_INOC_scaffold_405_23
unknown

Not on your lists

21153..21677
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_405_24
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21674..22870
DNA (1197bp) protein (399aa)
Peptidase C11 clostripain n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAV8_ODOSD
peptidase C11 clostripain
Peptidase C11 clostripain {ECO:0000313|EMBL:ADY32207.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus
SCNpilot_BF_INOC_scaffold_405_25
unknown

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22854..23123
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_405_26
unknown

Not on your lists

23433..24278
DNA (846bp) protein (282aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_405_27
unknown

Not on your lists

24413..24946
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_405_28
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25111..26211)
DNA (1101bp) protein (367aa)
Permease YjgP/YjgQ family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T400_PALPW
permease yjgp/yjgq family protein Tax=CG_Paludi_01
permease yjgp/yjgq family protein
SCNpilot_BF_INOC_scaffold_405_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26252..26797)
DNA (546bp) protein (182aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0X9_PALPW
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADQ78360.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter
SCNpilot_BF_INOC_scaffold_405_30
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27129..28595
DNA (1467bp) protein (489aa)
Permease YjgP/YjgQ family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T344_PALPW
permease yjgp/yjgq family protein Tax=CG_Paludi_01
permease yjgp/yjgq family protein
Displaying items 1-30 of 44 in total

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