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SCNpilot_BF_INOC_scaffold_528

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_528_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(199..1458)
-----------------
DNA (1260bp)
protein (420aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=CG_Paludi_01
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QNP8_9BACE
SCNpilot_BF_INOC_scaffold_528_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1477..1980)
-----------------
DNA (504bp)
protein (168aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E1_PALPW
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
SCNpilot_BF_INOC_scaffold_528_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2002..2379)
-----------------
DNA (378bp)
protein (126aa)
Glycine cleavage system H protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E2_PALPW
glycine cleavage system h protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter
SCNpilot_BF_INOC_scaffold_528_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2391..3500)
-----------------
DNA (1110bp)
protein (370aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E3_PALPW
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADQ80987.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" so
SCNpilot_BF_INOC_scaffold_528_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3520..4404)
-----------------
DNA (885bp)
protein (295aa)
Rhomboid family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E4_PALPW
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ADQ80988.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_528_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4419..5297)
-----------------
DNA (879bp)
protein (293aa)
Rhomboid family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E5_PALPW
rhomboid family protein Tax=CG_Paludi_01
rhomboid family protein
SCNpilot_BF_INOC_scaffold_528_7
GWC2_OD1_42_6_partial, Parcubacteria, Bacteria

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5416..5688
-----------------
DNA (273bp)
protein (91aa)
Bacterial nucleoid protein Hbs n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E6_PALPW
nucleoid protein hbs
Bacterial nucleoid protein Hbs {ECO:0000313|EMBL:KKS67410.1}; TaxID=1618928 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_6.;"
SCNpilot_BF_INOC_scaffold_528_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5876..6346
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZGI3_9PORP
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_528_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6355..7473
-----------------
DNA (1119bp)
protein (373aa)
Methylmalonyl-CoA mutase metallochaperone MeaB n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T167_PALPW
methylmalonyl-CoA mutase metallochaperone meab
Methylmalonyl-CoA mutase metallochaperone MeaB {ECO:0000313|EMBL:ADQ78448.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Pal
SCNpilot_BF_INOC_scaffold_528_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7442..7984)
-----------------
DNA (543bp)
protein (181aa)
DJ-1 family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E7_PALPW
dj-1 family protein
DJ-1 family protein {ECO:0000313|EMBL:ADQ80991.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (
SCNpilot_BF_INOC_scaffold_528_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7986..8687)
-----------------
DNA (702bp)
protein (234aa)
TonB family C-domain protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JD13_9BACT
tonb family protein Tax=CG_Paludi_01
tonb family protein
SCNpilot_BF_INOC_scaffold_528_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8710..9126)
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y8X1_9BACE
transport energizing protein, ExbD/TolR family; K03559 biopolymer transport protein ExbD Tax=CG_Paludi_01
biopolymer transporter ExbD
SCNpilot_BF_INOC_scaffold_528_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9193..9885)
-----------------
DNA (693bp)
protein (231aa)
Biopolymer transporter ExbB n=2 Tax=Porphyromonadaceae RepID=U5CA15_9PORP
biopolymer transport protein ExbB; K03561 biopolymer transport protein ExbB Tax=CG_Paludi_01
biopolymer transport protein ExbB
SCNpilot_BF_INOC_scaffold_528_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9899..10615)
-----------------
DNA (717bp)
protein (239aa)
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E9_PALPW
SCNpilot_BF_INOC_scaffold_528_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10719..11591
-----------------
DNA (873bp)
protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8F0_PALPW
ATP-nad/acox kinase
SCNpilot_BF_INOC_scaffold_528_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11646..12422
-----------------
DNA (777bp)
protein (259aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=694427 species="Bacteria; Bacte
Glutamate racemase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7X7_PALPW
SCNpilot_BF_INOC_scaffold_528_17
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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13601..14986
-----------------
DNA (1386bp)
protein (462aa)
Por secretion system C-terminal sorting domain containing protein id=3098206 bin=GWF2_Bacteroidetes_43_63 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein Tax=GWF2_Bacteroidetes_43_63_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_528_18
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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14926..15300
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
LamG-like jellyroll fold id=2664528 bin=GWF2_Bacteroidetes_38_335 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
SCNpilot_BF_INOC_scaffold_528_19
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15315..16523)
-----------------
DNA (1209bp)
protein (403aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAG0_PEDSD
AraC type helix-turn-helix-domain-containing protein
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ADY52580.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedo
SCNpilot_BF_INOC_scaffold_528_20
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17811..20621)
-----------------
DNA (2811bp)
protein (937aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IRC4_9PORP
4Fe-4S ferredoxin {ECO:0000313|EMBL:KHM47315.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
4Fe-4S ferredoxin
SCNpilot_BF_INOC_scaffold_528_21
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20885..21943)
-----------------
DNA (1059bp)
protein (353aa)
Alkaline phosphatase {ECO:0000313|EMBL:KJF42450.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN1
alkaline phosphatase
alkaline phosphatase id=2843163 bin=GWA2_Bacteroidetes_42_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_528_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21971..22288)
-----------------
DNA (318bp)
protein (106aa)
Transcriptional regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F0_PALPW
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADQ79594.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicig
SCNpilot_BF_INOC_scaffold_528_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22298..23566)
-----------------
DNA (1269bp)
protein (423aa)
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=CG_Paludi_01
Lytic transglycosylase catalytic n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F1_PALPW
lytic transglycosylase
SCNpilot_BF_INOC_scaffold_528_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23573..24274)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D0F1_9BACE
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_528_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24287..25165)
-----------------
DNA (879bp)
protein (293aa)
Chromosome segregation DNA-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F3_PALPW
chromosome segregation DNA-binding protein
Chromosome segregation DNA-binding protein {ECO:0000313|EMBL:ADQ79597.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter
SCNpilot_BF_INOC_scaffold_528_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25189..25962)
-----------------
DNA (774bp)
protein (258aa)
Chromosome segregation ATPase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F4_PALPW
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:ADQ79598.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propion
SCNpilot_BF_INOC_scaffold_528_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26095..27789
-----------------
DNA (1695bp)
protein (565aa)
Gliding-associated putative ABC transporter substrate-binding component GldG n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F5_PALPW
gliding-associated ABC transporter substrate-binding component gldg
Gliding-associated putative ABC transporter substrate-binding component GldG {ECO:0000313|EMBL:ADQ79599.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadacea
SCNpilot_BF_INOC_scaffold_528_28
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(27811..28563)
-----------------
DNA (753bp)
protein (251aa)
Transposase IS200 like family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QKS2_9CYAN
Transposase IS200 like family protein {ECO:0000313|EMBL:ERT08559.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;
hypothetical protein
SCNpilot_BF_INOC_scaffold_528_29
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28838..29506)
-----------------
DNA (669bp)
protein (223aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D1_PALPW
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_528_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29858..30310
-----------------
DNA (453bp)
protein (151aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D3_PALPW
Displaying items 1-30 of 58 in total

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