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SCNpilot_BF_INOC_scaffold_677

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_677_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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80..667
DNA (588bp) protein (196aa)
50S ribosomal protein L25 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S5_PALPW
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=694427 sp
SCNpilot_BF_INOC_scaffold_677_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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627..1241
DNA (615bp) protein (205aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S4_PALPW
SCNpilot_BF_INOC_scaffold_677_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1270..1677
DNA (408bp) protein (136aa)
Heat shock protein Hsp15 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S3_PALPW
heat shock protein hsp15
Heat shock protein Hsp15 {ECO:0000313|EMBL:ADQ79367.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludi
SCNpilot_BF_INOC_scaffold_677_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1695..2240
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79366.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
SCNpilot_BF_INOC_scaffold_677_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2304..3179
DNA (876bp) protein (292aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porp
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S1_PALPW
SCNpilot_BF_INOC_scaffold_677_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3182..3736
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ADQ79364.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ADQ79364.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonad
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S0_PALPW
SCNpilot_BF_INOC_scaffold_677_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3913..4767
DNA (855bp) protein (285aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Paludi_01
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3R9_PALPW
SCNpilot_BF_INOC_scaffold_677_8
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

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4772..6439
DNA (1668bp) protein (556aa)
hypothetical protein MzeaS_06256 id=4317271 bin=GWF2_Bacteroidetes_41_61 species=Mesoflavibacter zeaxanthinifaciens genus=Mesoflavibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_BF_INOC_scaffold_677_9
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6450..7685)
DNA (1236bp) protein (412aa)
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RAB4_9BACE
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:EOA53022.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS00
cys/met metabolism pyridoxal-phosphate-dependent protein
SCNpilot_BF_INOC_scaffold_677_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7733..10192)
DNA (2460bp) protein (820aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3R5_PALPW
SCNpilot_BF_INOC_scaffold_677_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10456..12228
DNA (1773bp) protein (591aa)
amp-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=CG_Paludi_01
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3R4_PALPW
amp-dependent synthetase and ligase
SCNpilot_BF_INOC_scaffold_677_12
unknown

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12366..12542
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_677_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12733..13587
DNA (855bp) protein (285aa)
ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=CG_Paludi_01
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3R1_PALPW
SCNpilot_BF_INOC_scaffold_677_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13601..14332
DNA (732bp) protein (244aa)
transcriptional acitvator, baf family (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3R0_PALPW
SCNpilot_BF_INOC_scaffold_677_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14316..15572
DNA (1257bp) protein (419aa)
Putative outer membrane protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q9_PALPW
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:ADQ79353.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source=
SCNpilot_BF_INOC_scaffold_677_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15731..17131
DNA (1401bp) protein (467aa)
Tetratricopeptide repeat protein n=4 Tax=Bacteroidales RepID=C7XFV5_9PORP
tetratricopeptide repeat protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_677_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17183..17707
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q8_PALPW
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_677_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17740..19632
DNA (1893bp) protein (631aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0X2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78353.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
SCNpilot_BF_INOC_scaffold_677_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19675..20481
DNA (807bp) protein (269aa)
Extracellular solute-binding protein family 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0X3_PALPW
family 3 extracellular solute-binding protein Tax=CG_Paludi_01
family 3 extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_677_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20494..21411
DNA (918bp) protein (306aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsucc
Homoserine O-succinyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0X4_PALPW
SCNpilot_BF_INOC_scaffold_677_21
unknown

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21443..21718
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_677_22
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21630..23288)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FLJ9_BACFG
transposase IS4 family protein rbh
Transposase IS4 family protein {ECO:0000313|EMBL:CEA16440.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source=
SCNpilot_BF_INOC_scaffold_677_23
Flavobacteriaceae bacterium S85, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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23758..24573
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI000255A577
SCNpilot_BF_INOC_scaffold_677_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24752..26077
DNA (1326bp) protein (442aa)
PhoH family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F2_PALPW
phoh family protein
PhoH family protein {ECO:0000313|EMBL:ADQ78311.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (
SCNpilot_BF_INOC_scaffold_677_25
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26072..27037)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Bacteroides eggerthii CAG:109 RepID=R5JVD5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY56669.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
SCNpilot_BF_INOC_scaffold_677_26
unknown

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comp(27543..27689)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 26 items

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