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SCNpilot_BF_INOC_scaffold_1114

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1114_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1114_2
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299..646
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645152
transposase
Transposase {ECO:0000313|EMBL:AJP47696.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_1114_3
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

698..988
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037E2A6E
Uncharacterized protein {ECO:0000313|EMBL:EPZ15169.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
LacI family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1114_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(942..2972)
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38
PA-phosphatase {ECO:0000313|EMBL:GAO35504.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PA-phosphatase-like phosphoesterase
SCNpilot_BF_INOC_scaffold_1114_5
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2990..4195)
DNA (1206bp) protein (402aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BHR9_RALP1
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
MFS transporter
SCNpilot_BF_INOC_scaffold_1114_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4192..5505)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
SCNpilot_BF_INOC_scaffold_1114_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5517..7253)
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
SCNpilot_BF_INOC_scaffold_1114_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7250..8290)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_BF_INOC_scaffold_1114_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8293..9705)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
SCNpilot_BF_INOC_scaffold_1114_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9856..11256)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacil
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
heavy metal sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1114_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11261..11938)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F84F0
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
two component heavy metal response winged helix family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1114_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11967..12338)
DNA (372bp) protein (124aa)
NC domain protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNN3_AZOSU
NC domain protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
NC domain protein
SCNpilot_BF_INOC_scaffold_1114_13
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(12344..12559)
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
SCNpilot_BF_INOC_scaffold_1114_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13132..13479
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B9263
putative lipoprotein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
lipoprotein
SCNpilot_BF_INOC_scaffold_1114_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13725..14471
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1114_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14606..14896
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1114_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14893..15774
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D8D51
putative replication initiator and transcription repressor protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RepA replication protein
SCNpilot_BF_INOC_scaffold_1114_18
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15940..16518
DNA (579bp) protein (193aa)
ParA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC195
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:EXF45896.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
ATPase
SCNpilot_BF_INOC_scaffold_1114_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16529..16774
DNA (246bp) protein (82aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
parB partition protein
SCNpilot_BF_INOC_scaffold_1114_20
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16771..17304
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2
transposase
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_1114_21
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17301..17825
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1
peptidase
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_1114_22
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18070..20058
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA
type VI secretion protein
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.
SCNpilot_BF_INOC_scaffold_1114_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20144..22090)
DNA (1947bp) protein (649aa)
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK06_9BURK
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHR70978.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_00
Lead, cadmium, zinc and mercury transporting ATPase
SCNpilot_BF_INOC_scaffold_1114_24
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

22244..22522
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JVJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCG91259.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" s
hypothetical protein
SCNpilot_BF_INOC_scaffold_1114_25
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22558..22902
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB74622.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
SCNpilot_BF_INOC_scaffold_1114_26
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23007..24131
DNA (1125bp) protein (375aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW60_ACCPU
efflux transporter RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACV37870.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="A
SCNpilot_BF_INOC_scaffold_1114_27
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24131..27214
DNA (3084bp) protein (1028aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW59_ACCPU
Cation efflux system protein CzcA {ECO:0000313|EMBL:KFB74620.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
heavy metal efflux pump, CzcA family
SCNpilot_BF_INOC_scaffold_1114_28
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27207..27509
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW58_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37868.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
SCNpilot_BF_INOC_scaffold_1114_29
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27506..28762
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW57_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37867.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
SCNpilot_BF_INOC_scaffold_1114_30
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28755..29492
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6Z3V4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89078.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.
hypothetical protein
Displaying items 1-30 of 37 in total

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