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SCNpilot_BF_INOC_scaffold_161

Search features with annotation key words

Displaying items 31-60 of 479 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_161_31
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20337..21386)
DNA (1050bp) protein (350aa)
Pilus-associated protein pilM id=7720885 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Cell division protein FtsA {ECO:0000313|EMBL:ERK72772.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type IV pilus assembly protein PilM
SCNpilot_BF_INOC_scaffold_161_32
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21421..22248)
DNA (828bp) protein (276aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=135802
Type 4 prepilin-like proteins leader peptide-processing enzyme id=7720884 bin=CNBR_ACT species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
peptidase A24A domain-containing protein
SCNpilot_BF_INOC_scaffold_161_33
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22245..24062)
DNA (1818bp) protein (606aa)
Putative uncharacterized protein id=7720883 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERK72774.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_161_34
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24065..24748)
DNA (684bp) protein (228aa)
Putative uncharacterized protein id=7720882 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02304.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
SCNpilot_BF_INOC_scaffold_161_35
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24745..26145)
DNA (1401bp) protein (467aa)
Putative uncharacterized protein id=7720881 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25717.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_BF_INOC_scaffold_161_36
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26255..26680)
DNA (426bp) protein (142aa)
Putative uncharacterized protein id=7720880 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFF58382.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
Tfp pilus assembly protein PilE
SCNpilot_BF_INOC_scaffold_161_37
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26796..28058)
DNA (1263bp) protein (421aa)
Putative type IV fimbrial assembly protein PilC n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5K5_LEIAQ
Putative type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:ERK72778.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatic
Type II secretion system F domain-containing protein
SCNpilot_BF_INOC_scaffold_161_38
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28058..29590)
DNA (1533bp) protein (511aa)
Twitching motility protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW73_LEIAQ
Twitching motility protein {ECO:0000313|EMBL:ERK72779.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
twitching motility protein
SCNpilot_BF_INOC_scaffold_161_39
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29613..31268)
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003651E90
Type II secretion system protein E {ECO:0000313|EMBL:EAR25722.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
type II secretion system protein E
SCNpilot_BF_INOC_scaffold_161_40
unknown

Not on your lists

comp(31413..31829)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_161_41
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31804..32607)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFF4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR25710.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_161_42
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32742..36614)
DNA (3873bp) protein (1291aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' id=7720829 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
DNA-directed RNA polymerase subunit beta'
SCNpilot_BF_INOC_scaffold_161_43
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36661..40140)
DNA (3480bp) protein (1160aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Agromyces italicus RepID=UPI0003B5B9E5
DNA-directed RNA polymerase subunit beta
SCNpilot_BF_INOC_scaffold_161_44
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40411..41163)
DNA (753bp) protein (251aa)
hypothetical protein id=7719354 bin=CNBR_ACT species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KGM02222.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_161_45
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41383..42222
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BB53_9MICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE76523.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebras
SCNpilot_BF_INOC_scaffold_161_46
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42265..43407
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036A5151
Glucose dehydrogenase {ECO:0000313|EMBL:KGJ82322.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
Quinoprotein glucose dehydrogenase B
SCNpilot_BF_INOC_scaffold_161_47
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43412..43864
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CUD2_CLAM3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN02719.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiga
SCNpilot_BF_INOC_scaffold_161_48
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43966..44580
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RCD8_CLAMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ00536.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedoni
SCNpilot_BF_INOC_scaffold_161_49
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44538..44846)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00037ED840
Uncharacterized protein {ECO:0000313|EMBL:KJL35050.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-alanyl ligase
SCNpilot_BF_INOC_scaffold_161_50
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44885..45340)
DNA (456bp) protein (152aa)
dehydrogenase n=1 Tax=Agromyces italicus RepID=UPI0003B56504
Uncharacterized protein {ECO:0000313|EMBL:KJL36585.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dehydrogenase with different specificities
SCNpilot_BF_INOC_scaffold_161_51
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45382..45876)
DNA (495bp) protein (165aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryo
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000365AA94
hypothetical protein
SCNpilot_BF_INOC_scaffold_161_52
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46103..47623
DNA (1521bp) protein (507aa)
ATP-dependent helicase (EC:3.6.1.-)
DEAD/DEAH box helicase domain protein n=2 Tax=Microbacterium RepID=H8E920_9MICO
DEAD/DEAH box helicase {ECO:0000313|EMBL:EXJ53228.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_BF_INOC_scaffold_161_53
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47936..48571)
DNA (636bp) protein (212aa)
ADP-ribose pyrophosphatase n=1 Tax=Humibacter albus RepID=UPI0003B6C56A
Uncharacterized protein {ECO:0000313|EMBL:ERK69509.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_161_54
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48670..49299
DNA (630bp) protein (210aa)
Putative esterase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BB82_9MICO
putative esterase
Putative esterase {ECO:0000313|EMBL:CCE76536.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis
SCNpilot_BF_INOC_scaffold_161_55
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49309..49974)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2AB76_9BACI
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFD42863.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicro
LuxR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_161_56
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49971..51152)
DNA (1182bp) protein (394aa)
Histidine kinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0C5_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KFD42862.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
histidine kinase
SCNpilot_BF_INOC_scaffold_161_57
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(51341..52147)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2ADS7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI41261.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_161_58
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(52144..53070)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2A8T4_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI41262.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
ABC transporter-like protein
SCNpilot_BF_INOC_scaffold_161_59
unknown

Not on your lists

comp(53185..53718)
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_161_60
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53816..58588
DNA (4773bp) protein (1591aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003720C3F
ATP-dependent RNA helicase
Uncharacterized protein {ECO:0000313|EMBL:AGW40595.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
Displaying items 31-60 of 479 in total

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