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SCNpilot_BF_INOC_scaffold_161_42

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(32742..36614)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 999.99
  • Bit_score: 2209
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=7720829 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 999.99
  • Bit_score: 2216
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 999.99
  • Bit_score: 2198
  • Evalue 0.0

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3873
GTGATCGACGCAACCACTTTCGATCAGCTGCGCATCGGCCTTGCCACGAGCAAGGACATCCGCGAGTGGTCGTACGGCGAGGTCAAGAAGCCCGAGACCATCAACTACCGCACCCTCAAGCCCGAGAAGGACGGCCTGTTCGGCGAGCAGATCTTCGGACCGAGCCGCGACTGGGAGTGCTCGTGCGGCAAGTACAAGCGCGTGCGCTTCAAGGGCATCGTCTGCGAGCGCTGCGGCGTGGAGGTCACCAAGAGCTCCGTCCGTCGTGAGCGCATGGGCCACATCGAGCTCGCCGCCCCGGTGACGCACATCTGGTACTTCAAGGGTGTGCCGAGCCGCCTCGGCTACCTGCTCGACATGGCGCCGAAGGACCTCGAGAAGGTCATCTACTTCGCCGCGTACATGGTCATCAACGTCGACGAGGAGGGTCGCCACGCCGACCTCCCCGGGCTCGAGAACGAGCTGCGCCTCGAGGTCAAGAACCTCGAGCAGCAGCGCGACGACCGCATCAACGCGCGTCTCGTGCAGCTCGAGGCCGACCTCGCCGCGCTCGAGGAGGAGGGCGCCAAGTCCGACCAGAAGCGCAAGGTGAAGGACGCCGGCGAGAAGGAGATGGCGCAGATCCGCAAGTCGTTCGACGAGCAGATCGGCCAGCTCGAGCGGGTCTGGGAGGACTTCCGCAACCTCAAGGTCGGCGACCTGAAGCCCGAGGACTCCGTATTCCACGAGCTGCAGGACCGCTACGGCCTGTACTTCGAGGCGTACATGGGCGCGGAGGCGATCCAGCGTCGCCTCGAGGCGTTCGACCTCGAGGCGGAGGCCGAGCTGCTGCACGAGCAGATCGCGAACGGCAAGGGTCAGAAGAAGATCCGCGCCATCAAGCGCCTGCGCGTCGTCAACTCGTTCCTGCAGACCGGCAACTCGCCGGCCGCCATGGTGCTCGACGTCGTGCCGGTCATCCCGCCGGAGCTGCGCCCCATGGTCCAGCTCGACGGCGGCCGCTTCGCGACCTCCGACCTGAACGACCTCTACCGTCGCGTGATCAACCGCAACAACCGTCTGCGTCGTCTGCTCGACCTCGGTGCCCCCGAGATCATCGTGAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCCCTGTTCGACAACGGCCGCCGCGGCCGCCCGGTCACCGGTACCGGCAACCGCGCGCTCAAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGTTCGGTCATCATCGTGGGCCCGCAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGCAGATGGCGCTCGAGCTGTTCAAGCCGTTCGTCATCAAGCGCCTCATCGACCTGTCGCACGCGCAGAACATCAAGGCCGCGAAGCGCATGGTGGAGCGGTCGCGCCCGCAGGTGTGGGACGTGCTCGAGGAGATCATCCGCGAGCGCCCCGTGCTGCTGAACCGCGCGCCCACGCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCGCAGCTCGTGGAGGGCAAGGCGATCCAGCTGCACCCGCTCGTCTGCGCCGCGTTCAACGCGGACTTCGACGGCGACCAGATGGCCGTGCACCTTCCCCTCTCGGTGGAGGCGCAGGCCGAGGCCCGCATCCTGATGCTCGCCTCGAACAACATCCTGAAGCCGTCGGACGGCCGCCCGGTGACGCTGCCCTCGCAGGACATGATCATCGGCCTGCACCACCTCACGACCGTCCGCGAGGGCGCCGTGGGTGAGGGCCGCGCGTTCGCGTCGATCGCCGAGGCGATCCTCGCGAAGGACGAGGGCACCCTCGACCTCAACGCGAAGGTCCGCATCCGTCTCGAGGGCGTGTACCTCGAGAACGCGGACGAGGACTTCGTGCAGGGCTCGACCAAGGTGCTCGAGACGACCCTCGGCCGTGCGCTCTTCAACCAGGCGCTCCCGACCGACTACTGGTACGTCGAGGCCGTCGCCGACAAGGGCAAGATCTCCGCGATCGTCAACGACCTCGCGGAGCGCTACCCGAAGGTGGAGGTCGCGGCCGCGCTGGACCGCATCAAGGACGCCGGCTTCTACTGGGCCACGCGTTCGGGCGTGACCGTCGCGCTCAGCGACATCATCACCCCGAAGGACAAGCCCGCCATCGTGTCCAAGCACGAGAAGCAGGCCGCGAAGATCCAGGGCGAGTTCGACAAGGGTCTCATCGACGACGCCACGCGCCGCAAGGAGCTCATCGACATCTGGACGGAGGCGACCAACGAGATCGCCGCGTCGATGCAGGAGAGCTACCCGAAGGACAACAACATCTTCCGGATGGTGTCGTCGGGCGCCCGTGGTAACTGGCTGCAGGTCCGCAACATCTCGGGTATCCGCGGCCTGGTCGCGAACCCGAAGGGTGAGACCATCGCCCGTCCGATCATCTCGTCCTACCGCGAGGGCCTGTCGGTGGCGGAGTACTTCATCGCCACGCACGGTGCCCGCAAGGGTCTCGCCGACACCGCCCTCCGCACCGCGGACTCGGGCTACCTGACGCGTCGTCTCGTCGACGTCTCGCAGGACGTCATCATCCGCGAGGACGACTGCGGCACGACGAAGGGCCTCGAGATCCGCATCGCGGCGAAGGTGGGCGACGAGCTCATCCGCGACGAGAACGTGGAGAACTCGGTGTTCGCCCGCTCGCTCGCCGAGGACGCGGTGGACGCGAAGGGCACGGTCGTCGCCGTGGCCGGCTCCGACGTGGGCGACGTGCTCATCAACGAGCTCATCGCGGCGGGCGTCGAGACCATCAAGGTGCGTTCGGTGCTCACCTGCGAGTCGGCGGTCGGCGTCTGCGCCGCCTGCTACGGCCGTTCGCTCGCGACCGGCAAGCTCGTGGACATCGGCGAGGCGGTCGGCATCATCGCGGCCCAGTCGATCGGTGAGCCCGGAACGCAGCTCACGATGCGTACCTTCCACCAGGGTGGTACCGCCGGTGCCGACGACATCACGCAGGGTCTGCCGCGTGTCACCGAGCTCTTCGAGGCCCGCACCCCGAAGGGCGCGAGCCCGATCGCGGAGGCCGCCGGTCGCATTGAGATCGAGGACACCGAGAAGCAGCGCCGCATCATCCTGACGCCGGACAACGGCGACGAGCCGCAGATCTACCCCGTGCTCAAGCGCGCCACCCTCCTCGTGGAGGACGGCCAGCACGTGGAGCTCGGTCAGCAGTTCGTGGTCGGCAACCTGGACCCGAAGGAGGTGCTGCGCGTGCAGGGCGTCCGCGCCGTGCAGCAGCACCTGGTCGACGGCGTGCAGGGCGTCTACCGCAGCCAGGGTGTGCCGATCCACGACAAGCACATCGAGGTCATCGTGCGCCAGATGATGCGCAAGGTGACCGTCGTGGAGCACGGCGACACCGAGCTGCTGCCGGGTGAGCTCGTGGACCGTTCGCGGTACACGGAGATCAACCGTGCGGCGATCGTCGAGGGCAAGAAGCCCGCGTCGGCGCGTCAGGAGGTCATGGGCATCACCAAGGCCTCGCTCGCGACCGAGTCGTGGCTGTCCGCCGCATCGTTCCAGGAGACCACCCGCGTGCTCACGCAGGCCGCGATGGAGGGTCGCTCCGACCCGCTGGTCGGTCTCAAGGAGAACGTCATCATCGGTCAGCTCATCCCCGCGGGCACCGGGCTCTCGAAGTACCGGAACGTGGCGGTCGAGGCGACCGAGGAGGCGAAGGCGGAGCGTTACCCGAACCGCATCTTCGCCGACGACTCGGCGTTCTCGGAGGCCGACCTGAGCTTCGTCGACTTCGACAGCTTCAGCTCGGACGACTTCCAGCCCGGCACCTACAACTGA
PROTEIN sequence
Length: 1291
VIDATTFDQLRIGLATSKDIREWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECSCGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVINVDEEGRHADLPGLENELRLEVKNLEQQRDDRINARLVQLEADLAALEEEGAKSDQKRKVKDAGEKEMAQIRKSFDEQIGQLERVWEDFRNLKVGDLKPEDSVFHELQDRYGLYFEAYMGAEAIQRRLEAFDLEAEAELLHEQIANGKGQKKIRAIKRLRVVNSFLQTGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKAAKRMVERSRPQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVREGAVGEGRAFASIAEAILAKDEGTLDLNAKVRIRLEGVYLENADEDFVQGSTKVLETTLGRALFNQALPTDYWYVEAVADKGKISAIVNDLAERYPKVEVAAALDRIKDAGFYWATRSGVTVALSDIITPKDKPAIVSKHEKQAAKIQGEFDKGLIDDATRRKELIDIWTEATNEIAASMQESYPKDNNIFRMVSSGARGNWLQVRNISGIRGLVANPKGETIARPIISSYREGLSVAEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTKGLEIRIAAKVGDELIRDENVENSVFARSLAEDAVDAKGTVVAVAGSDVGDVLINELIAAGVETIKVRSVLTCESAVGVCAACYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHQGGTAGADDITQGLPRVTELFEARTPKGASPIAEAAGRIEIEDTEKQRRIILTPDNGDEPQIYPVLKRATLLVEDGQHVELGQQFVVGNLDPKEVLRVQGVRAVQQHLVDGVQGVYRSQGVPIHDKHIEVIVRQMMRKVTVVEHGDTELLPGELVDRSRYTEINRAAIVEGKKPASARQEVMGITKASLATESWLSAASFQETTRVLTQAAMEGRSDPLVGLKENVIIGQLIPAGTGLSKYRNVAVEATEEAKAERYPNRIFADDSAFSEADLSFVDFDSFSSDDFQPGTYN*