ggKbase home page

SCNpilot_BF_INOC_scaffold_258

Search features with annotation key words

Displaying items 31-60 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_258_31
actinobacterium acMicro-1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28026..28238)
DNA (213bp) protein (71aa)
hypothetical protein id=7722214 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KGA06439.1}; TaxID=1504316 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_258_32
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28348..29055
DNA (708bp) protein (236aa)
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=7722215 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJC63250.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
fabG; 3-oxoacyl-ACP reductase
SCNpilot_BF_INOC_scaffold_258_33
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29067..30050
DNA (984bp) protein (328aa)
Transcriptional regulator, LacI family n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5F5_CELFA
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEE47878.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strai
SCNpilot_BF_INOC_scaffold_258_34
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30092..33184)
DNA (3093bp) protein (1031aa)
Carbohydrate binding family 6 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A266_CELGA
Carbohydrate binding family 6 {ECO:0000313|EMBL:AEI10586.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13
Carbohydrate binding family 6
SCNpilot_BF_INOC_scaffold_258_35
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33335..33973)
DNA (639bp) protein (213aa)
serB; phosphoserine phosphatase; K01079 phosphoserine phosphatase [EC:3.1.3.3] id=7722216 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
serB2; hypothetical protein (EC:3.1.3.3)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:ERK69879.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_BF_INOC_scaffold_258_36
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34018..35259)
DNA (1242bp) protein (414aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] id=7722217 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyr
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
SCNpilot_BF_INOC_scaffold_258_37
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35307..36524
DNA (1218bp) protein (406aa)
putative glycosyl transferase id=7722218 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGJ78580.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
putative glycosyl transferase
SCNpilot_BF_INOC_scaffold_258_38
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36537..37328
DNA (792bp) protein (264aa)
ABC transporter ATP-binding protein n=1 Tax=Agromyces italicus RepID=UPI0003B31DF1
modF; putative molybdate ABC transporter ATP-binding subunit
Putative molybdate ABC transporter ATP-binding subunit {ECO:0000313|EMBL:CAN01771.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibact
SCNpilot_BF_INOC_scaffold_258_39
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


37400..37648
DNA (249bp) protein (83aa)
50S ribosomal protein L31 type B n=2 Tax=Microbacterium RepID=H8E2V9_9MICO
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" s
hypothetical protein
SCNpilot_BF_INOC_scaffold_258_40
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37734..39212)
DNA (1479bp) protein (493aa)
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=7722221 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EPR75642.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
DNA polymerase III subunit epsilon
SCNpilot_BF_INOC_scaffold_258_41
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39245..40972)
DNA (1728bp) protein (576aa)
trehalose synthase n=1 Tax=Humibacter albus RepID=UPI0003B5395F
Maltose alpha-D-glucosyltransferase {ECO:0000313|EMBL:ERK69907.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665
trehalose synthase
SCNpilot_BF_INOC_scaffold_258_42
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41024..41944
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI0003688922
Hydrolase {ECO:0000313|EMBL:AJW79044.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
putative hydrolase
SCNpilot_BF_INOC_scaffold_258_43
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41941..43029
DNA (1089bp) protein (363aa)
Putative glycosyl transferase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0REG1_CLAMS
Mannosyltransferase {ECO:0000313|EMBL:KDP90097.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
glycosyl transferase
SCNpilot_BF_INOC_scaffold_258_44
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43081..43539)
DNA (459bp) protein (153aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein id=7722240 bin=CNBR_ACT species=unknown genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KIE52149.1}; TaxID=1550399 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
YbaK/prolyl-tRNA synthetase associated region
SCNpilot_BF_INOC_scaffold_258_45
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43539..44192)
DNA (654bp) protein (218aa)
Phosphoglycerate mutase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJM0_9ACTN
Phosphoglycerate mutase {ECO:0000313|EMBL:EAR24346.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
phosphoglycerate mutase
SCNpilot_BF_INOC_scaffold_258_46
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44233..45093)
DNA (861bp) protein (287aa)
NAD-dependent deacetylase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B40F9E
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03173.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
NAD-dependent protein deacetylase, SIR2 family
SCNpilot_BF_INOC_scaffold_258_47
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45169..45975
DNA (807bp) protein (269aa)
hypothetical protein; K00599 [EC:2.1.1.-] id=7722243 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03172.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
putative rRNA methylase
SCNpilot_BF_INOC_scaffold_258_48
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46032..47261
DNA (1230bp) protein (410aa)
D-alanyl-D-alanine endopeptidase n=1 Tax=Glaciibacter superstes RepID=UPI0003B64131
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:EAR24343.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
D-alanyl-D-alanine endopeptidase
SCNpilot_BF_INOC_scaffold_258_49
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47355..48137)
DNA (783bp) protein (261aa)
hypothetical protein id=7722249 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03170.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
lipolytic enzyme
SCNpilot_BF_INOC_scaffold_258_50
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48246..48509
DNA (264bp) protein (88aa)
Membrane protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MRW6_9MICO
Membrane protein {ECO:0000313|EMBL:ERG63410.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
integral membrane protein
SCNpilot_BF_INOC_scaffold_258_51
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48599..49840
DNA (1242bp) protein (414aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] id=7722252 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=312284 species="Bacteria; Actinobacteria.;" s
dinB; DNA polymerase IV (EC:2.7.7.7)
SCNpilot_BF_INOC_scaffold_258_52
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49895..51673
DNA (1779bp) protein (593aa)
Type III restriction protein res subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2X5_9MICO
Type III restriction protein res subunit {ECO:0000313|EMBL:EIC08855.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laev
hypothetical protein
SCNpilot_BF_INOC_scaffold_258_53
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51897..53138
DNA (1242bp) protein (414aa)
Putative transcriptional regulator, GntR family n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FTB1_ISOV2
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:AEG45275.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericol
SCNpilot_BF_INOC_scaffold_258_54
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53265..56669)
DNA (3405bp) protein (1135aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbact
DNA polymerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B0B0F
dnaE2; DNA polymerase III, alpha subunit
SCNpilot_BF_INOC_scaffold_258_55
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56669..58222)
DNA (1554bp) protein (518aa)
nucleotidyltransferase/DNA polymerase; K14161 protein ImuB id=7722256 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
nucleotidyltransferase/DNA polymerase
Nucleotidyltransferase/DNA polymerase {ECO:0000313|EMBL:BAJ75739.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceu
SCNpilot_BF_INOC_scaffold_258_56
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58267..58566)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H3K8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY35214.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_258_57
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58586..59287)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036A5DC1
Uncharacterized protein {ECO:0000313|EMBL:EPR75627.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_258_58
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59333..60001)
DNA (669bp) protein (223aa)
Cold-shock DNA-binding domain n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHE7_METPP
Cold shock-like protein CspA {ECO:0000313|EMBL:EWS60398.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
cold shock DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_258_59
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60162..61052
DNA (891bp) protein (297aa)
Luciferase family protein id=7720576 bin=CNBR_ACT species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Monooxygenase {ECO:0000313|EMBL:KIF67378.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
luciferase family protein
SCNpilot_BF_INOC_scaffold_258_60
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61114..61764)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Actinomyces massiliensis F0489 RepID=J1HP25_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJF47765.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensi
TetR family transcriptional regulator
Displaying items 31-60 of 171 in total

View Taxonomy