ggKbase home page

SCNpilot_BF_INOC_scaffold_2575_7

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: 5085..6323

Top 3 Functional Annotations

Value Algorithm Source
putative ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] id=7722077 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 279.0
  • Bit_score: 394
  • Evalue 1.20e-106
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04362.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 345.0
  • Bit_score: 388
  • Evalue 1.60e-104
putative ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 264.0
  • Bit_score: 384
  • Evalue 2.80e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frigoribacterium sp. MEB024 → Frigoribacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GTGACTGAGGTCTCCGCGAACCCCACGGCCGACGCCGAGCACCCCGAGGTCCACGTCATCGACACCCGTGAGGAGTACCTCCAGGCGGTGGAGGCCCTCGCGGGCGGCAGCGGCCCCTTCGCGGTCGACGCCGAGCGCGCGTCCGGCTTCCGCTACTCGCAGCGGGCGTACCTCATCCAGGTGTTCCGGCGCGGAGCGGGCGCCTTCCTCTTCGACCCGCCGGCCATCGGCTCCTTCGCGGAGCTGCAGACGATCATGCGCCCGGAGGAATGGATCCTGCACGCCGCGAGCCAGGACCTCGCGTGCCTGCGCGAGGTGGGGCTCGACCCCGAGGTCATCTTCGACACCGAGCTCGGGGCGCGGCTCGCGGGGCTTCCGCGCGTCGGGCTGGCGACCGTCGTCGAGGAGCTCCTCGGCATCCACCTCGCCAAGGCGCACTCCGCCGCCGACTGGTCCACGCGTCCGCTGCCGCAGGGGTGGCTCGTGTACGCGGCCCTCGACGTCGAGCTGCTTCCCGACCTCCGGGACCGCATCGGCGCGCTCCTCGACGAGGCGGGCAAGGCGGAGATCGCACGCCAGGAGTTCGCGGCCGTGCTCGAGAAGACGACCCCCGTCCGGCAGGAGCCCTGGCGCCGGCTGTCCGGGATGCACTCGCTGCGCTCGCCCCGCCAGCTCGCGATCGCGCGAGCGCTCTGGACGGCCCGCGACGAGCTCGCCCAGCAGCTCGACACCGCACCGGGGCGACTCGTGCCCGACCTCTCGCTCGTCGCGGTCGCGAAGGCGCAGCCCGCGAGCAAGCGCGACCTCGCAGCGCTCAAGGACTTCACCGCGCGACGGCGTGCCCGCCCCGCGGGTGTGGGCCGAGAAGAACCCGGAGGCCGATCGTCGCCTCAAGCTGGCTCGCGCCGCGCTGACCGTGCGCGCCGAGGAGCTCGCCATCCCGGTGGAGAACATGCTGACGCCCGAGACCCTGCGCCGGGTCGCGTGGGCGCCCCCCGCCGACACGACGCCCGAGACGGTCGCCACCGCGCTCGCCGATCAGGGTGCACGACCCTGGCAGCTCGAGCAGCTCGCGGCTCTCATCGCCGACGCGTTTGTCGAGGCGCGCCAAGCGCCGGGGCCCGCCCCCGCGGACGCGTAGTAGCTTCCGTCGAACGATTCGAGCGCGCCCCGTGGCCGCTGCCTAGGATCGTGAACGACACCCGGATGCGCGCCCGCGCGCCCGCATCCGTCCCCTGA
PROTEIN sequence
Length: 413
VTEVSANPTADAEHPEVHVIDTREEYLQAVEALAGGSGPFAVDAERASGFRYSQRAYLIQVFRRGAGAFLFDPPAIGSFAELQTIMRPEEWILHAASQDLACLREVGLDPEVIFDTELGARLAGLPRVGLATVVEELLGIHLAKAHSAADWSTRPLPQGWLVYAALDVELLPDLRDRIGALLDEAGKAEIARQEFAAVLEKTTPVRQEPWRRLSGMHSLRSPRQLAIARALWTARDELAQQLDTAPGRLVPDLSLVAVAKAQPASKRDLAALKDFTARRRARPAGVGREEPGGRSSPQAGSRRADRARRGARHPGGEHADARDPAPGRVGAPRRHDARDGRHRARRSGCTTLAARAARGSHRRRVCRGAPSAGARPRGRVVASVERFERAPWPLPRIVNDTRMRARAPASVP*