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SCNpilot_BF_INOC_scaffold_2575

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2575_1
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(23..1030)
DNA (1008bp) protein (336aa)
ATP/GTP-binding integral membrane protein id=7722083 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ATPase {ECO:0000313|EMBL:AJW80466.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
ATPase
SCNpilot_BF_INOC_scaffold_2575_2
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1164..2063
DNA (900bp) protein (300aa)
sseA; thiosulfate sulfurtransferase (EC:2.8.1.1); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=7722082 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
thtR; rhodanese-related sulfurtransferase
SCNpilot_BF_INOC_scaffold_2575_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2064..2528
DNA (465bp) protein (155aa)
cysteine desufuration protein SufE n=1 Tax=Microbacteriaceae RepID=UPI00036AC54E
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:ERK70824.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC
hypothetical protein
SCNpilot_BF_INOC_scaffold_2575_4
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2525..3253
DNA (729bp) protein (243aa)
putative pyrimidine reductase id=7722080 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CAQ01759.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (
SCNpilot_BF_INOC_scaffold_2575_5
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3220..4428)
DNA (1209bp) protein (403aa)
secreted protein; K06889 id=7722079 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KGJ73514.1}; Flags: Fragment;; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopk
secreted protein
SCNpilot_BF_INOC_scaffold_2575_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4496..5092
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B4FBC5
Uncharacterized protein {ECO:0000313|EMBL:ERK70822.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2575_7
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5085..6323
DNA (1239bp) protein (413aa)
putative ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] id=7722077 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04362.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s
putative ribonuclease D
SCNpilot_BF_INOC_scaffold_2575_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6338..7285
DNA (948bp) protein (316aa)
acetyl-CoA acetyltransferase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6EF18
atoB; acetyl-CoA acetyltransferase
Acetyl-coA acetyltransferase {ECO:0000313|EMBL:AAT88912.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CT
SCNpilot_BF_INOC_scaffold_2575_9
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7228..7473
DNA (246bp) protein (82aa)
acetyl-CoA acetyltransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287D753
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04273.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s
fadA; acetyl-CoA acetyltransferase
SCNpilot_BF_INOC_scaffold_2575_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7476..9644
DNA (2169bp) protein (723aa)
fadB; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.17) id=7722075 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
fadB; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EAR23736.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_BF_INOC_scaffold_2575_11
unknown

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9740..9925
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2575_12
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9976..12816
DNA (2841bp) protein (947aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5FFE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT42246.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
SCNpilot_BF_INOC_scaffold_2575_13
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12779..14275)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035D9421
Major facilitator transporter {ECO:0000313|EMBL:KFL26770.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E
EmrB/QacA subfamily drug resistance transporter
SCNpilot_BF_INOC_scaffold_2575_14
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14379..16322)
DNA (1944bp) protein (648aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] id=7722072 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase
SCNpilot_BF_INOC_scaffold_2575_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16344..18488)
DNA (2145bp) protein (715aa)
Aconitate hydratase {ECO:0000313|EMBL:KIC57293.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KIC57293.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
aconitate hydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379E2B5
acnA; aconitase A
Displaying 15 items

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