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SCNpilot_BF_INOC_scaffold_458_9

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(9997..11457)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B48D85 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 487.0
  • Bit_score: 848
  • Evalue 3.70e-243
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 487.0
  • Bit_score: 841
  • Evalue 1.30e-241
30S ribosomal protein S1 {ECO:0000313|EMBL:CAN01808.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michig similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 487.0
  • Bit_score: 841
  • Evalue 6.40e-241

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGACTACCGCAACGACCGCCTCGGCTACCAAGCAGGTCGCCATCAACGACATCGGATCTGCTGAAGACTTCCTGGCCGCGGTCGAACTGACCCTCAAGTTCTTCAACGACGGAGACCTCATCGAAGGCACCGTCGTCAAGATCGACCGCGACGAGGTCCTCCTCGACGTCGGCTACAAGACCGAGGGTGTCATCCCCTCGCGCGAGCTCTCCATCAAGCACGACGTGGACCCGACCGAGGTCGTCTCGGTCGGCGACAGCGTCGAGGCGCTCGTCCTCCAGAAGGAGGACAAGGAGGGTCGCCTCATCCTGTCCAAGAAGCGCGCCCAGTACGAGCGCGCCTGGGGCGACGTCGAGAAGATCAAGGATTCCGATGGCGTCGTGACCGGTTCGGTCATCGAGGTCGTCAAGGGCGGCCTGATCGTCGACATCGGCCTCCGCGGCTTCCTGCCGGCCTCGCTCATCGAGCTGCGCCGCGTCCGCGACCTCACGCCGTACCTCGGCCAGGAGATCGAGGCGAAGATCCTCGAGCTCGACAAGAACCGCAACAACGTCGTGCTGAGCCGCCGCGCGCTGCTCGAGCAGACGCAGTCGGAGTCGCGTTCGACCTTCCTCAACAACCTCCAGAAGGGCCAGGTCCGCAAGGGCGTCGTGTCCTCGATCGTCAACTTCGGCGCGTTCGTCGACCTCGGCGGCGTGGACGGCCTCGTGCACGTCTCGGAGCTCTCGTGGAAGCACATCGAGCACGCGTCCGAGGTCGTCGAGGTGGGCCAGGAGGTCACCGTCGAGATCCTCGAGGTCGACCTCGACCGTGAGCGCGTGTCGCTCTCGCTCAAGGCGACCCAGGAGGACCCGTGGCAGGTCTTCGCCCGCACCCACGCGATCGGCCAGATCGCGCCGGGCAAGGTCACCAAGCTCGTCCCGTTCGGCGCGTTCGTGCGCGTCGCGGACGGCATCGAGGGCCTCGTGCACATCTCGGAGCTGTCGGGCAAGCACGTCGAGCTCGCCGAGCAGGTCGTGTCGGTCGGCGACGAGGTGTTCGTCAAGGTCATCGACATCGACCTCGAGCGTCGCCGCATCTCGCTGAGCCTCAAGCAGGCCAACGAGGGCATCGACCCGCACAACACCGAGTTCGACTCGGGCCTCGCCGCTCTGTACGGCATGGTCACCGAGTACGACGAGCAGGGCAACTACAAGTACCCGGAGGGCTTCGACCCGACCTCGGGCGAGTGGCTCGAGGGCTTCGAGGCCCAGCGCGACGCGTGGGAGGCCGAGTACGCGGCCGCCCAGGCCCGCTGGGAGGCCCACAAGAAGCAGATCCTCGCGGCCGAGGAGACCGAGGCCGAGCTCGAGGCGCGTCCGTCGGGCAACTCGTTCTCGTCGGAGGGCTCGATCAGCGGCACGCTCGCCGACGACGAGTCGCTCGCGGCGCTGCGCGAGAAGCTCAGCAGCAACTCCTGA
PROTEIN sequence
Length: 487
MTTATTASATKQVAINDIGSAEDFLAAVELTLKFFNDGDLIEGTVVKIDRDEVLLDVGYKTEGVIPSRELSIKHDVDPTEVVSVGDSVEALVLQKEDKEGRLILSKKRAQYERAWGDVEKIKDSDGVVTGSVIEVVKGGLIVDIGLRGFLPASLIELRRVRDLTPYLGQEIEAKILELDKNRNNVVLSRRALLEQTQSESRSTFLNNLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIEHASEVVEVGQEVTVEILEVDLDRERVSLSLKATQEDPWQVFARTHAIGQIAPGKVTKLVPFGAFVRVADGIEGLVHISELSGKHVELAEQVVSVGDEVFVKVIDIDLERRRISLSLKQANEGIDPHNTEFDSGLAALYGMVTEYDEQGNYKYPEGFDPTSGEWLEGFEAQRDAWEAEYAAAQARWEAHKKQILAAEETEAELEARPSGNSFSSEGSISGTLADDESLAALREKLSSNS*