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SCNpilot_BF_INOC_scaffold_458

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Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_458_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..650)
DNA (648bp) protein (216aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea
Thymidine phosphorylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR2_PELHB
thymidine phosphorylase
SCNpilot_BF_INOC_scaffold_458_2
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(702..1574)
DNA (873bp) protein (291aa)
UPF0042 nucleotide-binding protein A20C1_02841 n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJQ3_9ACTN
Nucleotide-binding protein SZ60_08250 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_458_3
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1571..2413)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00036876FA
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; nuclease subunit of the excinuclease complex
SCNpilot_BF_INOC_scaffold_458_4
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2443..3444)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00036876FA
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C
SCNpilot_BF_INOC_scaffold_458_5
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3447..6422)
DNA (2976bp) protein (992aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=7722182 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A
SCNpilot_BF_INOC_scaffold_458_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6440..8518)
DNA (2079bp) protein (693aa)
UvrABC system protein B n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVX9_LEIAQ
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; UvrABC system protein B
SCNpilot_BF_INOC_scaffold_458_7
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8528..9145)
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=33014 species="Bacteria; Act
dephospho-CoA kinase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3DDF8
coaE; hypothetical protein
SCNpilot_BF_INOC_scaffold_458_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9238..9882
DNA (645bp) protein (215aa)
hypothetical protein id=7722179 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR24385.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_BF_INOC_scaffold_458_9
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9997..11457)
DNA (1461bp) protein (487aa)
30S ribosomal protein S1 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B48D85
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:CAN01808.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michig
SCNpilot_BF_INOC_scaffold_458_10
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11563..12546)
DNA (984bp) protein (328aa)
NDP sugar epimerase cell-division inhibitor; K07071 id=7722177 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03312.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
NDP sugar epimerase cell-division inhibitor rbh
SCNpilot_BF_INOC_scaffold_458_11
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12543..13172)
DNA (630bp) protein (210aa)
hypothetical protein id=7722176 bin=CNBR_ACT species=Renibacterium salmoninarum genus=Renibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KGJ75971.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_458_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13169..14887)
DNA (1719bp) protein (573aa)
hypothetical protein id=7722174 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN01809.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiga
SCNpilot_BF_INOC_scaffold_458_13
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14954..15214)
DNA (261bp) protein (87aa)
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04330.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s
hypothetical protein; K11189 phosphocarrier protein id=7722173 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
phosphotransferase system HPr (HPr) family protein
SCNpilot_BF_INOC_scaffold_458_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15266..17932)
DNA (2667bp) protein (889aa)
polA; DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] id=7722166 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Lei
polA; DNA polymerase I
SCNpilot_BF_INOC_scaffold_458_15
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17993..18418
DNA (426bp) protein (142aa)
hypothetical protein id=7722165 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ComA operon protein 2 {ECO:0000313|EMBL:EPR75682.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_458_16
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18419..19024)
DNA (606bp) protein (202aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B785C1
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04326.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s
response regulator with antiterminator output domain
SCNpilot_BF_INOC_scaffold_458_17
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19171..20367)
DNA (1197bp) protein (399aa)
AAA ATPase central domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JBW6_FRASU
ATPase
ATPase {ECO:0000313|EMBL:AIR99170.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
SCNpilot_BF_INOC_scaffold_458_18
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20367..21452)
DNA (1086bp) protein (362aa)
ogt; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit (EC:2.4.1.-)
UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit {ECO:0000313|EMBL:AEV81494.1}; EC=2.4.1.- {ECO:0000313|EMBL:AEV81494.1};; TaxID=134676 species="Bacteria; Actinobacteria
UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SCN4_ACTS5
SCNpilot_BF_INOC_scaffold_458_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21606..23063)
DNA (1458bp) protein (486aa)
pyk; pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] id=7722160 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
pyk; pyruvate kinase II
SCNpilot_BF_INOC_scaffold_458_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23116..24573)
DNA (1458bp) protein (486aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RB69_LEIAQ
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERK72470.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica A
gltD; NADPH-dependent glutamate synthase beta chain
SCNpilot_BF_INOC_scaffold_458_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24576..29183)
DNA (4608bp) protein (1536aa)
gltB; glutamate synthase subunit alpha; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] id=7722158 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:ERK72469.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC
glutamate synthase subunit alpha
SCNpilot_BF_INOC_scaffold_458_22
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29294..30382)
DNA (1089bp) protein (363aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteri
lgt; prolipoprotein diacylglyceryl transferase id=7722157 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
lgt; prolipoprotein diacylglyceryl transferase
SCNpilot_BF_INOC_scaffold_458_23
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30393..31166)
DNA (774bp) protein (258aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] id=7722156 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=110935 species="B
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
SCNpilot_BF_INOC_scaffold_458_24
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31163..32392)
DNA (1230bp) protein (410aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Mic
Tryptophan synthase beta chain n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQ48_9MICO
trpB; tryptophan synthase beta chain
SCNpilot_BF_INOC_scaffold_458_25
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32389..33165)
DNA (777bp) protein (259aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cla
trpC; hypothetical protein (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4BA8C
SCNpilot_BF_INOC_scaffold_458_26
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33167..33397)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5Y6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD32881.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_458_27
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33475..34050)
DNA (576bp) protein (192aa)
peptidase n=1 Tax=Agromyces subbeticus RepID=UPI0003B6A8A8
hypothetical protein
Strain 70137, complete genome {ECO:0000313|EMBL:AJM77760.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
SCNpilot_BF_INOC_scaffold_458_28
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34071..35609)
DNA (1539bp) protein (513aa)
trpE1; anthranilate synthase component I (EC:4.1.3.27)
anthranilate synthase subunit I n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B46F5F
Anthranilate synthase component I {ECO:0000313|EMBL:EAR24401.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_BF_INOC_scaffold_458_29
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35606..35977)
DNA (372bp) protein (124aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B371BC
SCNpilot_BF_INOC_scaffold_458_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35974..36735)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXU5_LEIAQ
Displaying items 1-30 of 108 in total

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