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SCNpilot_BF_INOC_scaffold_515_12

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(10268..11806)

Top 3 Functional Annotations

Value Algorithm Source
LigD protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BA09_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 514.0
  • Bit_score: 549
  • Evalue 2.90e-153
ligD; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 514.0
  • Bit_score: 549
  • Evalue 8.10e-154
LigD protein {ECO:0000313|EMBL:CCE75978.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPP similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 514.0
  • Bit_score: 549
  • Evalue 4.00e-153

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGCGCGACGCCGCGAAGACGCCCGAGCCGATGGGCGGAGCGGATGCGGCGGACGCCGCCGAGGCGCGCTCGGGCGACCGGCCGATGTTCGTCATCCAGGAGCATCACGCGACCCGACTGCACCACGACTTCCGCCTGGAGCACGACGGCGTGCTCGTGTCGTGGGCGCTGCCGAAGGGCCTGCCGACCGATCCGGGCGTCAACCACCTCGCCGTGCAGACCGAGGACCACCCTCTCGAGTACGGCTCCTTCGAGGGCACCATCCCGAGGGGCGAGTACGGCGCGGGCACGGTCACGATCTGGGACACCGGCAGCTACGAGCTCGAGAAGTGGCGCGACGGCCAGGAGGTCATCGTGACCATCCACGGGCGAGCGCACGGGACGCACCGGCTCGCGCTCATCCGCACGGGCGGCGACGACGCCAAGCCGCAGTGGCTCATCCACCTCATGAAGGACCAGACACCGCACCCCGCGCACGACGGCTCCGAGTCGTACCGCAAGCCGCCGTCCACCTCCCCCGGGCGCGGGCTGCGGCGCGGGAAGACGGTCGTCGGCTCGCGGAAGCAGCTCGCGGGGGTCGTGCACCCGATGCTCGCCACGCCGGCGGAGCCCGCGGAGCTGCGGGGCCGTGCGGGGTGGCGCTTCGAGATGAAGTGGGACGGCTTCCGCGCCATCGCCCGGATCTCCGGTGACGAGGTCACCCTCACCTCCCGCAACGGCCTCGACCTGACCCCGACGTTCCCCGAGCTCGCCGTGCTCGCGGATGCCGTGCACGGCGACGCGGTGCTCGACGGCGAGATCGTCGCCCCCGACGAGCGGGGGGTGCCGCGCTTCGCGCGCATCCAGCAACGCGCGGGCCTCACCGGCCCTCGAGACGTGGAGCGGGCACGGCGTGCGGTGGGGGTGGAGTTCTACGCGTTCGACGTGCTCGAGGAGGGCGGACGCCCGCTCACCGCGCTGCCCTACGCCGAGCGGCGCGCGCGGCTCGGGGAGCTCGTGACGGAGAACGCCCTCGTGCGGGTGCCACCCGACGCGGGCGACGACCTCGACGCGGCACTCGCGACGAGCCGCGAGCTGGGCCTCGAGGGGGTCATGGCGAAGCGCACCGACTCCCCCTACCGCGAGGGCCGCCGCAGCCGCGACTGGCTGAAGCTCAAGCACACTCTCGCCCAGGAGGTCGTCGTGGTCGGCTGGCGCACCGGCAACGGGATCCGCGCCGACACCCTCGGCTCGCTGCTCGTCGGCATCCCGGATGCCGAGGGGCGCCTCCGCTACGCCGGGCGCGTCGGCACGGGGTTCAGCGAGCGCGACCTCGCGAAGGCGCGGGCGCGGCTCGACGCGCTCGCCGTCGACTCCGCCGCGCTCGACGGTGTCCCCGCGGAGGACGCCCGCGACGCCCACTGGGTGACGCCGGCGCTCGTCGGCGAGGTCGAGTACGGCGAGGCGACCCCCGACGGGCGGCTGCGGCATCCGGTGTGGCGGGGGTGGCGGTTCGACAAGTCGCCCGCGGAGGTGCGCTGGGAGCGCACAATGGGATGA
PROTEIN sequence
Length: 513
MRDAAKTPEPMGGADAADAAEARSGDRPMFVIQEHHATRLHHDFRLEHDGVLVSWALPKGLPTDPGVNHLAVQTEDHPLEYGSFEGTIPRGEYGAGTVTIWDTGSYELEKWRDGQEVIVTIHGRAHGTHRLALIRTGGDDAKPQWLIHLMKDQTPHPAHDGSESYRKPPSTSPGRGLRRGKTVVGSRKQLAGVVHPMLATPAEPAELRGRAGWRFEMKWDGFRAIARISGDEVTLTSRNGLDLTPTFPELAVLADAVHGDAVLDGEIVAPDERGVPRFARIQQRAGLTGPRDVERARRAVGVEFYAFDVLEEGGRPLTALPYAERRARLGELVTENALVRVPPDAGDDLDAALATSRELGLEGVMAKRTDSPYREGRRSRDWLKLKHTLAQEVVVVGWRTGNGIRADTLGSLLVGIPDAEGRLRYAGRVGTGFSERDLAKARARLDALAVDSAALDGVPAEDARDAHWVTPALVGEVEYGEATPDGRLRHPVWRGWRFDKSPAEVRWERTMG*