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SCNpilot_BF_INOC_scaffold_515

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_515_1
unknown

Not on your lists

127..324
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_515_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421..1383)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U2D7_ALIDB
hypothetical protein
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; P
SCNpilot_BF_INOC_scaffold_515_3
unknown

Not on your lists

comp(1470..1664)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_515_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1714..2565)
DNA (852bp) protein (284aa)
hypothetical protein id=7721139 bin=CNBR_ACT species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
PPE-repeat proteins {ECO:0000313|EMBL:CDK00019.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2562..3830)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VYI7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPR75201.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3910..6537
DNA (2628bp) protein (876aa)
DEAD/DEAH box helicase n=1 Tax=Agromyces italicus RepID=UPI0003B5A80C
superfamily II RNA helicase
Superfamily II RNA helicase {ECO:0000313|EMBL:BAJ75497.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain
SCNpilot_BF_INOC_scaffold_515_7
unknown

Not on your lists

comp(6560..6889)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_515_8
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7082..8224
DNA (1143bp) protein (381aa)
Low-affinity inorganic phosphate permease id=7719257 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
pitB; low-affinity inorganic phosphate permease
Low-affinity inorganic phosphate permease {ECO:0000313|EMBL:CAN02148.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganen
SCNpilot_BF_INOC_scaffold_515_9
Leifsonia sp. SCN1, Leifsonia, Actinomycetales, CNBR_ACT, Actinobacteria, Bacteria

Not on your lists

8221..8439
DNA (219bp) protein (73aa)
id=7719256 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
id=7719256 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
SCNpilot_BF_INOC_scaffold_515_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8510..10048
DNA (1539bp) protein (513aa)
aspA; hypothetical protein (EC:4.3.1.1)
Aspartate ammonia-lyase id=7719255 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Aspartate ammonia-lyase {ECO:0000313|EMBL:EAR25156.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_BF_INOC_scaffold_515_11
unknown

Not on your lists

comp(10080..10241)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_515_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10268..11806)
DNA (1539bp) protein (513aa)
LigD protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BA09_9MICO
ligD; hypothetical protein
LigD protein {ECO:0000313|EMBL:CCE75978.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPP
SCNpilot_BF_INOC_scaffold_515_13
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11838..12758)
DNA (921bp) protein (307aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:KJC65825.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KJC65825.1};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="A
ATP-dependent DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase id=7719252 bin=CNBR_ACT species=Arthrobacter crystallopoietes genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
SCNpilot_BF_INOC_scaffold_515_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12834..13661
DNA (828bp) protein (276aa)
Probable DNA repair protein N136_00911 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBS7_LEIAQ
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_15
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13658..14461
DNA (804bp) protein (268aa)
abortive phage infection protein n=1 Tax=Ruania albidiflava RepID=UPI0003B7986A
Abortive phage infection protein {ECO:0000313|EMBL:EWS80181.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresis
Abortive infection protein
SCNpilot_BF_INOC_scaffold_515_16
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14549..14815)
DNA (267bp) protein (89aa)
Rho termination factor n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI000302657B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR27223.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
SCNpilot_BF_INOC_scaffold_515_17
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14815..15696)
DNA (882bp) protein (294aa)
dehydrogenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5502C
NAD(P)-dependent oxidoreductase, short chain dehydrogenase/reductase family
SPG23_c1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29247.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
SCNpilot_BF_INOC_scaffold_515_18
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15759..16793)
DNA (1035bp) protein (345aa)
Membrane protein id=7719249 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Membrane protein {ECO:0000313|EMBL:EAR25761.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16793..17290)
DNA (498bp) protein (166aa)
Putative uncharacterized protein id=7719248 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25762.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17319..18221
DNA (903bp) protein (301aa)
alpha/beta hydrolase n=1 Tax=Humibacter albus RepID=UPI0003B4E237
Uncharacterized protein {ECO:0000313|EMBL:ERK73179.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_21
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18252..19019)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000320C419
rhamnosyltransferase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_BF_INOC_scaffold_515_22
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19029..20498)
DNA (1470bp) protein (490aa)
Putative 3-methyladenine DNA glycosylase id=7719247 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative 3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EAR25158.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
adenosine deaminase
SCNpilot_BF_INOC_scaffold_515_23
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20571..21860
DNA (1290bp) protein (430aa)
Putative FAD-linked oxidoreductase {ECO:0000313|EMBL:KJL24380.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL24380.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbact
FAD/FMN-containing dehydrogenase id=7719245 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
FAD/FMN-containing dehydrogenase
SCNpilot_BF_INOC_scaffold_515_24
unknown

Not on your lists

21930..22487
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_515_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22522..23067
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42244.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
hypothetical protein
SCNpilot_BF_INOC_scaffold_515_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23051..23872
DNA (822bp) protein (274aa)
Oxidoreductase, SDR family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBM9_SINAD
oxidoreductase, SDR family
Oxidoreductase, SDR family {ECO:0000313|EMBL:AGA26061.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera
SCNpilot_BF_INOC_scaffold_515_27
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23960..24643
DNA (684bp) protein (228aa)
Nudix-related transcriptional regulator NrtR n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W2V0_9MICO
Nudix-related transcriptional regulator NrtR {ECO:0000313|EMBL:EPR77035.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS
NUDIX hydrolase
SCNpilot_BF_INOC_scaffold_515_28
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24669..25958
DNA (1290bp) protein (430aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;
quinolinate synthetase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288320C
quinolinate synthetase complex subunit A
SCNpilot_BF_INOC_scaffold_515_29
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25960..27561
DNA (1602bp) protein (534aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" sourc
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288CA8E
SCNpilot_BF_INOC_scaffold_515_30
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27558..28403
DNA (846bp) protein (282aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:ACZ29387.1}; EC=2.4.2.19 {ECO:0000313|EMBL:ACZ29387.1};; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae;
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BVB6_XYLCX
Displaying items 1-30 of 159 in total

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