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SCNpilot_BF_INOC_scaffold_515_142

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: 149605..150867

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4C0A9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 394.0
  • Bit_score: 527
  • Evalue 1.30e-146
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448 similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 418.0
  • Bit_score: 524
  • Evalue 1.90e-145
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 368.0
  • Bit_score: 491
  • Evalue 2.80e-136

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGGCCACCCCCCGCTCCACGTCGACGAAGGACACGGTCAAAGACGACCGCACGTCCGAGAAGACGGCGACGAAGACCGCTGCCGCGAAGACCGCGAGCAAGCCGGCCGCGAGCAAGCCGGCCGCCAAGGCGACCGCTCCCGCAGCGAAGCCCGCTGCCAAGACGGCGAAGGCCGCCACCGGAGCCGCCGCCAAGGCGCCCGTGAAGGCCGCGGCGAAGGCTGCCCCGAAGCCGGCGGCCAAGGCGCCCGCCAAGACCACCGGCGGCAAGGCCTCGCCCGCGAAGGCGAAGGACGCGGGGCTCGACGGCGACGACGAGCTCGACGAGGACGCCGAGATCGAGATCGACGGAGAGATCGAGGAGGAGACCGACGGCGAGGCGGCATCCGAGGACTCCGCCGACGGCGAGGACGCCGAGACGCCCGAGGCCAAGGAGGACGCCGGCGAGGAGGACTCGGAGGAAACCGAGGACGAGGAGTCGACGGGCAGCGACGAGCCGCTGCCGACCGGCGCGCTGCGCCTGTCCATGACGGACGACGACGACGAGGTGCCGGTCTACTCGGCCGCGATCACGGGCGCCACCGCCGACCCGGTCAAGGACTACCTCAAGCAGATCGGAAAGGTCGCCCTCCTCAACGCCGAGCAGGAGGTCGAGCTCGCGATGCGCATCGAGGCGGGCCTCTTCGCCGAGGAGAAGCTCTCCCAGATGACCGACCAGGAGAAGCGCAGCCAGCTCGGCCGCGAGCTGTCCTGGGTCGCCCGCGACGGGCAGCGCGCGAAGAACCACCTGCTGGGTGCCAACCTGCGTCTCGTGGTCTCCCTCGCGAAGCGCTACACGGGTCGCGGCATGCAGTTCCTCGACCTCATCCAGGAGGGCAACCTCGGCCTCATCCGCGCCGTCGAGAAGTTCGACTACACCAAGGGCTTCAAGTTCTCGACCTACGCGACGTGGTGGATCCGCCAGGCGATCACGCGCGCGATGGCCGACCAGGCGCGCACCATCCGCATCCCCGTGCACATGGTCGAGGTCATCAACAAGCTCGCCCGCGTGCAGCGGCAGATGCTTCAGGACCTGGGCCGAGAGCCCACCCCGGAGGAGCTGAGCCGCGAGCTCGACATGACCCCCGAGAAGGTCATCGAGGTGCAGAAGTACGGCCGCGAGCCGATCTCGCTGCACACGCCGCTCGGCGAGGACGGCGACAGCGAGTTCGGCGACCTCATCGAGGACACCGAGGCTCGCTCTCCGAGCGCGAGGCGGGCGTGA
PROTEIN sequence
Length: 421
MATPRSTSTKDTVKDDRTSEKTATKTAAAKTASKPAASKPAAKATAPAAKPAAKTAKAATGAAAKAPVKAAAKAAPKPAAKAPAKTTGGKASPAKAKDAGLDGDDELDEDAEIEIDGEIEEETDGEAASEDSADGEDAETPEAKEDAGEEDSEETEDEESTGSDEPLPTGALRLSMTDDDDEVPVYSAAITGATADPVKDYLKQIGKVALLNAEQEVELAMRIEAGLFAEEKLSQMTDQEKRSQLGRELSWVARDGQRAKNHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEARSPSARRA*