ggKbase home page

SCNpilot_BF_INOC_scaffold_515_148

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: 154584..155876

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003822CEB similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 423.0
  • Bit_score: 102
  • Evalue 7.80e-19
RNA polymerase {ECO:0000313|EMBL:KDQ71399.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 450.0
  • Bit_score: 103
  • Evalue 6.40e-19
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 324.0
  • Bit_score: 99
  • Evalue 2.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sp. NTK 937 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGGGGATGAGTCGACGGAGGTGCTCGACGTCGCGGCGGAGCACGAGGTCGTGCCCGAGCCCGCGGGTGACGAGGGCGTCGCGCGGCGCCGCATCCCGCGTCGCGCCTGGGTCGCGATCGCGGCGATCGGCGCCCTCGTGATCGGCGGCGGCGTGACCGGCGGGGTCGCGTGGGCGAACAAGGTCGCTCACGACGAGGCGGTCGCCGAGGCTCGGGCCGCTCGGCTGGTGACCGTGGATGCGGTGCGCGCGCAGCAGGGGGCGGTCGCGACGCTCGCGAGCTCCGTTACCGATGGCATCGCCGCGCGGGACGCGGTCGCGAGCCAGGTGCTCGCACACCAGGACCTCCTGGGCGGTGCCGAAGCGCTCGCGTCGCTCACCGCGGCGCACGCCGAGTTGGGGTCGGTGCTCGCCGACGTCGTCGGCGTCGACGAGCCCGGCTCCGGCTCCGTCGTTCCCGATGCGGTCCCGATGGAGTTGCCCGACGCGGTCGACCCCACGGCCGAGACAGAGCTCTTGCGCGCGCTCGCCCTCGCCCTGGGCGAGGATGCGGATGCCGCAGAGGCGTCCCGCGTCGAGCTCCTGGCGCGCGCGGCGCGGGTCGACACCGCGTCGGCCGCGCTCGACGCGCGGCTCGGCGAGACCGCGGCGTCCATCGCCGCGGTGCACGAGGCGCTGCTCGCGAGCCACGCGCTCGCCTCCGAGGAGACGCGTGCCGCGGCCGCGACCGCCGTGGCGGCCCTCGACGGTGCGGATGCCGCCGAGCTTCCCGGACTCCTCGCGGCCTACGCGAGCTCGGCATCCGCCGTGATCGCCGCGCACGACGCCGAGGCGGCACGTGTCGCCGCCGAGCAGGCTGCGGCGGCCGAGGCGGCCAGGCGGGCGCGCGGTGGCTCGCGCGGCGGAGGTGGCAGCACCGGCGGGGGCGGTGGCAGCGTCACGGGCGCGAGCGAGCAGCGCGGCGTGCTGAGCGAGACGAACGCCAACCGCTCGGCCAACGGGCTGGGCGGCCTCTCCTGGAACGGCACCCTGGCGTCCCGGTCCTGCTCGTTCGCGGCCGAGCTCGCCTCGCGCAACGGCGACCTGTACCACAGCAGCTTCGGCGGCGGGTTCTCCACCTGGGGCGAGAACGTAGCGTACGGGTACGGAAGCGCCTCGGCGGTCGTCGCCGGCTGGATGAACTCGTCCGGGCACCGCGCCAACATCCTGAACGGCGCGTTCACGATGATGGGCGCCTGCTCCTCGACCTCGAGCACGGGCCGCGTGTACTGGGTTCAGCAGTTCGGGGGCTGA
PROTEIN sequence
Length: 431
MGDESTEVLDVAAEHEVVPEPAGDEGVARRRIPRRAWVAIAAIGALVIGGGVTGGVAWANKVAHDEAVAEARAARLVTVDAVRAQQGAVATLASSVTDGIAARDAVASQVLAHQDLLGGAEALASLTAAHAELGSVLADVVGVDEPGSGSVVPDAVPMELPDAVDPTAETELLRALALALGEDADAAEASRVELLARAARVDTASAALDARLGETAASIAAVHEALLASHALASEETRAAAATAVAALDGADAAELPGLLAAYASSASAVIAAHDAEAARVAAEQAAAAEAARRARGGSRGGGGSTGGGGGSVTGASEQRGVLSETNANRSANGLGGLSWNGTLASRSCSFAAELASRNGDLYHSSFGGGFSTWGENVAYGYGSASAVVAGWMNSSGHRANILNGAFTMMGACSSTSSTGRVYWVQQFGG*