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SCNpilot_BF_INOC_scaffold_1411

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1411_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..210
-----------------
DNA (210bp)
protein (70aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:ADB48671.1}; EC=6.4.1.4 {ECO:0000313|EMBL:ADB48671.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexiba
Methylcrotonoyl-CoA carboxylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5Z8_CONWI
SCNpilot_BF_INOC_scaffold_1411_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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234..821
-----------------
DNA (588bp)
protein (196aa)
DSBA oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9W9_CONWI
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ADB53064.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei
SCNpilot_BF_INOC_scaffold_1411_3
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1393..1632)
-----------------
DNA (240bp)
protein (80aa)
Oxidoreductase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XT72_MICPN
oxidoreductase
FAD-linked oxidase {ECO:0000313|EMBL:KJK12796.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
SCNpilot_BF_INOC_scaffold_1411_4
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1788..2138
-----------------
DNA (351bp)
protein (117aa)
UPI0003CEE516 related cluster n=1 Tax=unknown RepID=UPI0003CEE516
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ESZ55699.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C1
SCNpilot_BF_INOC_scaffold_1411_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2228..3442
-----------------
DNA (1215bp)
protein (405aa)
Formaldehyde dehydrogenase, glutathione-independent n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7U1_CONWI
formaldehyde dehydrogenase
Formaldehyde dehydrogenase, glutathione-independent {ECO:0000313|EMBL:ADB52835.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
SCNpilot_BF_INOC_scaffold_1411_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3460..3903
-----------------
DNA (444bp)
protein (148aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=448385 species="Bacteria; Prote
Adenine phosphoribosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=APT_SORC5
SCNpilot_BF_INOC_scaffold_1411_7
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3974..4984)
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MIY0_9ACTO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KJK49317.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalie
cation diffusion facilitator family transporter
SCNpilot_BF_INOC_scaffold_1411_8
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5070..5849
-----------------
DNA (780bp)
protein (260aa)
RNA polymerase sigma factor n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI4_9ACTN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella ste
RNA polymerase, sigma 28 subunit, sig b/f/g subfamily
SCNpilot_BF_INOC_scaffold_1411_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5846..6973
-----------------
DNA (1128bp)
protein (376aa)
Mandelate racemase/muconate lactonizing enzyme-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASJ4_RUBXD
mandelate racemase/muconate lactonizing-like protein
Mandelate racemase/muconate lactonizing enzyme-like protein {ECO:0000313|EMBL:ABG05634.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacter
SCNpilot_BF_INOC_scaffold_1411_10
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6970..8763
-----------------
DNA (1794bp)
protein (598aa)
thiamine pyrophosphate protein (EC:1.2.2.2)
Pyruvate oxidase n=2 Tax=Nitrosococcus oceani RepID=Q3JDV2_NITOC
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KFI20570.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitroso
SCNpilot_BF_INOC_scaffold_1411_11
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8774..9223
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4JU73_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY00513.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
SCNpilot_BF_INOC_scaffold_1411_12
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9223..9984
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S1B8_MYCXE
hypothetical protein
Gluconate 2-dehydrogenase subunit 3 family protein {ECO:0000313|EMBL:EUA27827.1}; TaxID=1299329 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avi
SCNpilot_BF_INOC_scaffold_1411_13
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9995..11677
-----------------
DNA (1683bp)
protein (561aa)
glucose-methanol-choline oxidoreductase n=1 Tax=Mycobacterium avium RepID=UPI0003059353
glucose-methanol-choline oxidoreductase
GMC oxidoreductase family protein {ECO:0000313|EMBL:EUA21297.1}; TaxID=1299326 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 6
SCNpilot_BF_INOC_scaffold_1411_14
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11710..12714
-----------------
DNA (1005bp)
protein (335aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASG2_RUBXD
Short-chain dehydrogenase {ECO:0000313|EMBL:KGO98439.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter deflu
short chain dehydrogenase
SCNpilot_BF_INOC_scaffold_1411_15
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12749..14506
-----------------
DNA (1758bp)
protein (586aa)
Glycosyl hydrolase, glucoamylase n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BRL8_MYCCN
Glycoside hydrolase {ECO:0000313|EMBL:KDE97750.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 =
glycosyl hydrolase, glucoamylase
SCNpilot_BF_INOC_scaffold_1411_16
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14650..15456
-----------------
DNA (807bp)
protein (269aa)
RNA polymerase sigma factor SigF n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QMT1_9ACTO
RNA polymerase sigma factor SigF {ECO:0000313|EMBL:GAC69960.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
SCNpilot_BF_INOC_scaffold_1411_17
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15524..16144
-----------------
DNA (621bp)
protein (207aa)
Putative Heme/copper-type cytochrome/quinol oxidase, subunit 2 n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P6D3_STRVR
Putative Heme/copper-type cytochrome/quinol oxidase, subunit 2 {ECO:0000313|EMBL:ELS50892.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sour
cytochrome c oxidase subunit II
SCNpilot_BF_INOC_scaffold_1411_18
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16141..17319
-----------------
DNA (1179bp)
protein (393aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 1 n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X8N2_9PSEU
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EHR51401.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source=
cytochrome C oxidase subunit I
SCNpilot_BF_INOC_scaffold_1411_19
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17259..17663
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI000301ECBB
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EID56045.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharom
cytochrome c oxidase subunit I type
SCNpilot_BF_INOC_scaffold_1411_20
unknown

Not on your lists

17660..18022
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1411_21
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18019..18726
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036E4DCF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV82544.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 3104
SCNpilot_BF_INOC_scaffold_1411_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18716..19531
-----------------
DNA (816bp)
protein (272aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4V6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85642.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
SCNpilot_BF_INOC_scaffold_1411_23

Not on your lists

19528..20550
-----------------
DNA (1023bp)
protein (341aa)
ubiquinol-cytochrome C reductase n=1 Tax=actinobacterium SCGC AAA028-A23 RepID=UPI000373C403
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:KGA19204.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
Tat (twin-arginine translocation) pathway signal sequence
SCNpilot_BF_INOC_scaffold_1411_24
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20558..22018
-----------------
DNA (1461bp)
protein (487aa)
Cytochrome b/b6 domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M191_ACIFD
cytochrome b/b6 domain-containing protein
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:ACU54739.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;"
SCNpilot_BF_INOC_scaffold_1411_25
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21966..22208
-----------------
DNA (243bp)
protein (81aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K1G7_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHK88607.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora a
hypothetical protein
SCNpilot_BF_INOC_scaffold_1411_26
unknown

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comp(22708..22884)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1411_27
unknown

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comp(22906..23046)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1411_28
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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23355..25385
-----------------
DNA (2031bp)
protein (677aa)
Major subunit n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QKD6_9ACTO
Major subunit {ECO:0000313|EMBL:EHN75108.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
formate dehydrogenase subunit alpha
SCNpilot_BF_INOC_scaffold_1411_29
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25385..26212
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003636C80
Fe-S-cluster-containing hydrogenase
Fe-S-cluster-containing hydrogenase {ECO:0000313|EMBL:AEK44343.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediter
SCNpilot_BF_INOC_scaffold_1411_30
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26209..27201
-----------------
DNA (993bp)
protein (331aa)
polysulfide reductase n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003831363
polysulfide reductase
Polysulfide reductase {ECO:0000313|EMBL:EXU65100.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
Displaying items 1-30 of 52 in total

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