ggKbase home page

SCNpilot_BF_INOC_scaffold_1456

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1456_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..281)
DNA (279bp) protein (93aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JVP7_BURP8
Histamine dehydrogenase
Histamine dehydrogenase {ECO:0000313|EMBL:CDM25052.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_BF_INOC_scaffold_1456_2
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

415..1164
DNA (750bp) protein (250aa)
GntR family transcriptional regulator n=1 Tax=Streptomyces collinus Tu 365 RepID=S5UKX1_STRCU
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGS67533.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus
SCNpilot_BF_INOC_scaffold_1456_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1170..1871
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000367D20B
Predicted protein {ECO:0000313|EMBL:EFL05176.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1456_4
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1954..2736
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paenibacillus vortex V453 RepID=E5Z2R3_9BACL
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ETT32201.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FS
short-chain dehydrogenase/reductase SDR
SCNpilot_BF_INOC_scaffold_1456_5
Pseudomonas sp. RIT288, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2736..3488
DNA (753bp) protein (251aa)
20-beta-hydroxysteroid dehydrogenase FabG3 n=2 Tax=Mycobacterium marinum RepID=B2HLV5_MYCMM
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:EZP26643.1}; TaxID=1470589 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
fabG3; 20-beta-hydroxysteroid dehydrogenase FabG3
SCNpilot_BF_INOC_scaffold_1456_6
unknown

Not on your lists

4957..5277
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1456_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5229..6422)
DNA (1194bp) protein (398aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ADB50580.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ADB50580.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae;
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036FEFA2
SCNpilot_BF_INOC_scaffold_1456_8
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6415..7230)
DNA (816bp) protein (272aa)
Enoyl-CoA hydratase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JST3_STREN
enoyl-CoA hydratase
Enoyl-CoA hydratase {ECO:0000313|EMBL:AEW97989.1}; Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CCB78307.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomyce
SCNpilot_BF_INOC_scaffold_1456_9
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7227..8294)
DNA (1068bp) protein (356aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M3A239_9NOCA
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKE91737.1}; TaxID=191292 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1456_10
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8291..9457)
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JLS4_9NOCA
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHK85826.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
SCNpilot_BF_INOC_scaffold_1456_11
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9454..10476)
DNA (1023bp) protein (341aa)
Aminoglycoside phosphotransferase n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X579_SALTO
aminoglycoside phosphotransferase
Uncharacterized protein {ECO:0000313|EMBL:EME17526.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
SCNpilot_BF_INOC_scaffold_1456_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10491..11330)
DNA (840bp) protein (280aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8Y2_SPHTD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ40275.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaer
SCNpilot_BF_INOC_scaffold_1456_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11327..12163)
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8Y0_SPHTD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ40273.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaer
SCNpilot_BF_INOC_scaffold_1456_14
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12156..12983)
DNA (828bp) protein (276aa)
enoyl-CoA hydratase n=1 Tax=Mycobacterium sp. 155 RepID=UPI00036B556D
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AHH15485.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
SCNpilot_BF_INOC_scaffold_1456_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12980..13918)
DNA (939bp) protein (313aa)
Transcriptional regulator, IclR family id=3369096 bin=GWF2_Methylomirabilis_70_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
IclR family transcriptional regulator Tax=CSP1_5_NC10
IclR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1456_16
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14120..15286
DNA (1167bp) protein (389aa)
Acetyl-CoA acetyltransferase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2I6_ACIFD
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACU53230.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobiu
SCNpilot_BF_INOC_scaffold_1456_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15288..16589
DNA (1302bp) protein (434aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EHN09526.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EHN09526.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibactera
Butyryl-CoA dehydrogenase n=1 Tax=Patulibacter medicamentivorans RepID=H0E9W6_9ACTN
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_BF_INOC_scaffold_1456_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16589..17392
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD24_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB51536.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conex
SCNpilot_BF_INOC_scaffold_1456_19
Sphingomonas echinoides, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17781..18272)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C92EF
SCNpilot_BF_INOC_scaffold_1456_20
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18407..19318
DNA (912bp) protein (304aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Frankia sp. QA3 RepID=I8QUX4_9ACTO
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:EIV96262.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Fran
monooxygenase
SCNpilot_BF_INOC_scaffold_1456_21
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19305..20051)
DNA (747bp) protein (249aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAM97760.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAM97760.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-
enoyl-CoA hydratase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000369F065
enoyl-CoA hydratase/isomerase
SCNpilot_BF_INOC_scaffold_1456_22
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20051..20413)
DNA (363bp) protein (121aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Frankia sp. QA3 RepID=I8QLE4_9ACTO
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EIV90684.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1456_23
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20389..21039)
DNA (651bp) protein (217aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Gordonia sp. KTR9 RepID=J9S4R8_9ACTO
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:AFR49421.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp.
Displaying 23 items

View Taxonomy