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SCNpilot_BF_INOC_scaffold_2138

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2138_1
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..1490
-----------------
DNA (1488bp)
protein (496aa)
dicarboxylate-CoA ligase PimA n=1 Tax=Rhodococcus opacus RepID=UPI00029CB332
putative crotonobetaine/carnitine-CoA ligase
Plasmid 9, complete sequence {ECO:0000313|EMBL:AHK36177.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
SCNpilot_BF_INOC_scaffold_2138_2
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1474..2286
-----------------
DNA (813bp)
protein (271aa)
Acetoacetate decarboxylase id=4959261 bin=GWC2_Syntrophobacterales_56_13 species=Rhodococcus sp. EsD8 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
acetoacetate decarboxylase Tax=RBG_16_Deltaproteobacteria_58_17_curated
acetoacetate decarboxylase
SCNpilot_BF_INOC_scaffold_2138_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2345..4108
-----------------
DNA (1764bp)
protein (588aa)
Transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XYG7_RHOOP
Transcriptional regulator {ECO:0000313|EMBL:EKT82280.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
transcriptional regulator
SCNpilot_BF_INOC_scaffold_2138_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4136..4324)
-----------------
DNA (189bp)
protein (63aa)
primosome subunit DnaD n=1 Tax=Patulibacter americanus RepID=UPI0003B4F754
twin-arginine translocation protein, TatA/E family subunit
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacte
SCNpilot_BF_INOC_scaffold_2138_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4399..5151)
-----------------
DNA (753bp)
protein (251aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD75_NOCSJ
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter-like protein
SCNpilot_BF_INOC_scaffold_2138_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5138..6886)
-----------------
DNA (1749bp)
protein (583aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD76_NOCSJ
ABC transporter-like protein rbh
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABL79761.1}; Flags: Precursor;; TaxID=196162 sp
SCNpilot_BF_INOC_scaffold_2138_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6894..7817)
-----------------
DNA (924bp)
protein (308aa)
ABC-type transporter integral membrane subunit n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FZG5_9ACTN
putative High-affinity branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
SCNpilot_BF_INOC_scaffold_2138_8
unknown

Not on your lists

comp(7880..9262)
-----------------
DNA (1383bp)
protein (461aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2138_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9491..10261)
-----------------
DNA (771bp)
protein (257aa)
caiD; carnitinyl-CoA dehydratase (EC:4.2.1.-)
Carnitinyl-CoA dehydratase {ECO:0000313|EMBL:CCG03902.1}; EC=4.2.1.- {ECO:0000313|EMBL:CCG03902.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococ
Carnitinyl-CoA dehydratase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNF5_BLASD
SCNpilot_BF_INOC_scaffold_2138_10
RBG_13_ACD39_59_9_curated, ACD39, Bacteria

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10770..11027
-----------------
DNA (258bp)
protein (86aa)
putative transposase Tax=RBG_13_ACD39_59_9_curated
SCNpilot_BF_INOC_scaffold_2138_11
unknown

Not on your lists

comp(10976..11461)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2138_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11458..12729)
-----------------
DNA (1272bp)
protein (424aa)
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9D9_CONWI
catalytic domain of components of various dehydrogenase complexes
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ADB49106.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae
SCNpilot_BF_INOC_scaffold_2138_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12749..15043)
-----------------
DNA (2295bp)
protein (765aa)
Transketolase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9D8_CONWI
Transketolase domain protein {ECO:0000313|EMBL:ADB49105.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacte
transketolase
SCNpilot_BF_INOC_scaffold_2138_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15153..15596
-----------------
DNA (444bp)
protein (148aa)
Transcriptional regulator, AsnC family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0Q5_CONWI
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB53989.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
SCNpilot_BF_INOC_scaffold_2138_15
unknown

Not on your lists

comp(16123..16560)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2138_16
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16615..17301)
-----------------
DNA (687bp)
protein (229aa)
ABC transporter, ATP-binding protein n=3 Tax=Corynebacterium equii RepID=E9SZZ0_COREQ
ABC transporter ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGD24573.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.
SCNpilot_BF_INOC_scaffold_2138_17
unknown

Not on your lists

17400..17540
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2138_18
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17567..18349
-----------------
DNA (783bp)
protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN45691.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
SCNpilot_BF_INOC_scaffold_2138_19
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18312..19292)
-----------------
DNA (981bp)
protein (327aa)
Extracellular solute-binding protein family 3 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IW52_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KJK14034.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2138_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19490..20554
-----------------
DNA (1065bp)
protein (355aa)
class V aminotransferase n=1 Tax=Salinispora tropica RepID=UPI00036AC92B
Aminotransferase class V {ECO:0000313|EMBL:CCH17514.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lup
class V aminotransferase
SCNpilot_BF_INOC_scaffold_2138_21
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20564..21631
-----------------
DNA (1068bp)
protein (356aa)
aminotransferase class I/II n=1 Tax=Ruania albidiflava RepID=UPI0003B791C5
Aminotransferase class I/II {ECO:0000313|EMBL:KJK51792.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2138_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21631..22017
-----------------
DNA (387bp)
protein (129aa)
endoribonuclease L-PSP, putative; K07567 TdcF protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Endoribonuclease L-PSP id=4599718 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
endoribonuclease L-PSP
Displaying 22 items

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