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SCNpilot_BF_INOC_scaffold_2358

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2358_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUW6_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG04812.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
SCNpilot_BF_INOC_scaffold_2358_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(498..2036)
DNA (1539bp) protein (513aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA26325.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA26325.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Monosaccharide-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTA7_PSEUX
SCNpilot_BF_INOC_scaffold_2358_3
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2041..3279)
DNA (1239bp) protein (413aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034A6ED8
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT60986.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacteri
sugar ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_2358_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3279..4379)
DNA (1101bp) protein (367aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTA6_PSEUX
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA26324.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
SCNpilot_BF_INOC_scaffold_2358_5
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5005..6192)
DNA (1188bp) protein (396aa)
thiolase (EC:2.3.1.16)
Thiolase {ECO:0000313|EMBL:AAZ54913.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AAZ54913.1};; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermo
acetyl-CoA acetyltransferase n=1 Tax=Actinopolyspora halophila RepID=UPI0003665FB4
SCNpilot_BF_INOC_scaffold_2358_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6189..6938)
DNA (750bp) protein (250aa)
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EHN10252.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EHN10252.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales;
catJ; 3-oxoadipate:succinyl-CoA transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B n=1 Tax=Patulibacter medicamentivorans RepID=H0E7W2_9ACTN
SCNpilot_BF_INOC_scaffold_2358_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6935..7771)
DNA (837bp) protein (279aa)
3-oxoadipate CoA-transferase (EC:2.8.3.6)
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:ACZ90584.1}; EC=2.8.3.6 {ECO:0000313|EMBL:ACZ90584.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Strept
3-oxoadipate CoA-transferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AUC9_STRRD
SCNpilot_BF_INOC_scaffold_2358_8
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7764..8135)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003718917
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC60972.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
SCNpilot_BF_INOC_scaffold_2358_9
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8138..8335)
DNA (198bp) protein (66aa)
short-chain dehydrogenase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037F05A3
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEM83005.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violace
SCNpilot_BF_INOC_scaffold_2358_10
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8311..8922)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003606543
Short-chain dehydrogenase {ECO:0000313|EMBL:EST54507.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
oxidoreductase
SCNpilot_BF_INOC_scaffold_2358_11
unknown

Not on your lists

comp(8933..9661)
DNA (729bp) protein (243aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2358_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9804..11243)
DNA (1440bp) protein (480aa)
Putative oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GUE3_SORC5
Putative oxygenase subunit protein {ECO:0000313|EMBL:KFE68894.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" s
oxidoreductase
SCNpilot_BF_INOC_scaffold_2358_13
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11266..12498)
DNA (1233bp) protein (411aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ETT25638.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ETT25638.1};; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus
N-methylhydantoinase A n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MB72_9NOCA
5-oxoprolinase
SCNpilot_BF_INOC_scaffold_2358_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13189..14973)
DNA (1785bp) protein (595aa)
N-methylhydantoinase B {ECO:0000313|EMBL:EHN12951.1}; EC=3.5.2.14 {ECO:0000313|EMBL:EHN12951.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacterace
N-methylhydantoinase B n=1 Tax=Patulibacter medicamentivorans RepID=H0DZZ2_9ACTN
5-oxoprolinase rbh
SCNpilot_BF_INOC_scaffold_2358_15
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14981..16240)
DNA (1260bp) protein (420aa)
Aminopeptidase YpdF (MP-, MA-,MS-,AP-,NP-specific) n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MAU9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KDE14435.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2358_16
unknown

Not on your lists

comp(16332..16454)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2358_17
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16462..17319)
DNA (858bp) protein (286aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46NF1_CUPPJ
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:AAZ65320.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
SCNpilot_BF_INOC_scaffold_2358_18
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17380..18534)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000365187D
Uncharacterized protein {ECO:0000313|EMBL:KIC20700.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
SCNpilot_BF_INOC_scaffold_2358_19
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18939..19700
DNA (762bp) protein (254aa)
Transcriptional regulator GntR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E0Q7_9ACTN
Transcriptional regulator GntR family {ECO:0000313|EMBL:EHN12791.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="P
transcriptional regulator
SCNpilot_BF_INOC_scaffold_2358_20
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

19727..21073
DNA (1347bp) protein (449aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CSP1_3_Armatimonadetes
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
amidase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003661127
Displaying 20 items

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