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SCNpilot_BF_INOC_scaffold_3426

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3426_1
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..751
DNA (750bp) protein (250aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C2Z2_BEUC1
SCNpilot_BF_INOC_scaffold_3426_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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966..1634
DNA (669bp) protein (223aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:000025
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAI5_CONWI
SCNpilot_BF_INOC_scaffold_3426_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1634..3826
DNA (2193bp) protein (731aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAI6_CONWI
SCNpilot_BF_INOC_scaffold_3426_4
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4621..5616
DNA (996bp) protein (332aa)
ABC transporter substrate-binding protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B79A34
family 1 extracellular solute-binding protein
Extracellular solute-binding family protein {ECO:0000313|EMBL:EFE65627.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gha
SCNpilot_BF_INOC_scaffold_3426_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5806..6486
DNA (681bp) protein (227aa)
Binding-protein-dependent transport system n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0G6_9ACTO
Binding-protein-dependent transport system {ECO:0000313|EMBL:EON25084.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp.
ABC transporter permease
SCNpilot_BF_INOC_scaffold_3426_6
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6488..7327
DNA (840bp) protein (280aa)
sugar ABC transporter permease n=1 Tax=Streptomyces somaliensis RepID=UPI00029AC885
sugar ABC transporter permease
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:AIY47777.1}; TaxID=1273687 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp.
SCNpilot_BF_INOC_scaffold_3426_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7341..8516
DNA (1176bp) protein (392aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:AEA23303.1}; EC=3.6.3.20 {ECO:0000313|EMBL:AEA23303.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiacea
Glycerol-3-phosphate-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP37_PSEUX
SCNpilot_BF_INOC_scaffold_3426_8
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8802..9383
DNA (582bp) protein (194aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULL7_CELFN
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ADG74059.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="C
SCNpilot_BF_INOC_scaffold_3426_9
unknown

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comp(9704..10849)
DNA (1146bp) protein (382aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3426_10

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11691..12398
DNA (708bp) protein (236aa)
Amidophosphoribosyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAI8_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL04805.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidophosphoribosyltransferase
SCNpilot_BF_INOC_scaffold_3426_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(12402..12791)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E176_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12515.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
SCNpilot_BF_INOC_scaffold_3426_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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12808..13518
DNA (711bp) protein (237aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAJ0_CONWI
phosphoribosylglycinamide formyltransferase
SCNpilot_BF_INOC_scaffold_3426_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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13515..15143
DNA (1629bp) protein (543aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAJ1_CONWI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Co
SCNpilot_BF_INOC_scaffold_3426_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15204..15815
DNA (612bp) protein (204aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD69_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB53461.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
SCNpilot_BF_INOC_scaffold_3426_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15812..16627
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD68_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53460.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
SCNpilot_BF_INOC_scaffold_3426_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16688..17185
DNA (498bp) protein (166aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF88_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY82101.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
hypothetical protein
SCNpilot_BF_INOC_scaffold_3426_17
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(17741..18700)
DNA (960bp) protein (320aa)
Putative drug resistance transporter n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TMU9_9ACTO
Putative drug resistance transporter {ECO:0000313|EMBL:GAB34807.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.
putative integral membrane efflux protein
SCNpilot_BF_INOC_scaffold_3426_18
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(18697..19197)
DNA (501bp) protein (167aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QHX3_CATAD
EmrB/QacA subfamily drug resistance transporter
Putative drug resistance transporter {ECO:0000313|EMBL:GAB34807.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.
SCNpilot_BF_INOC_scaffold_3426_19
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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19312..19764
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J8R4_FRASC
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABD12328.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
SCNpilot_BF_INOC_scaffold_3426_20
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(20163..20858)
DNA (696bp) protein (232aa)
Transcriptional activator, TenA family n=1 Tax=Frankia sp. EUN1f RepID=D3CVY1_9ACTO
Transcriptional activator, TenA family {ECO:0000313|EMBL:EFC85247.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
tenA; transcriptional regulator tenA/thi-4
SCNpilot_BF_INOC_scaffold_3426_21
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(20851..21015)
DNA (165bp) protein (55aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQM30645.1}; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1
Displaying 21 items

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