ggKbase home page

SCNpilot_BF_INOC_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 407 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_165_1
unknown

Not on your lists

3..137
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_165_2
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131..979)
-----------------
DNA (849bp)
protein (283aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="S
Glutamate decarboxylase n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L216_9ACTO
gadB1; glutamate decarboxylase
SCNpilot_BF_INOC_scaffold_165_3
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(931..1455)
-----------------
DNA (525bp)
protein (175aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;
glutamate decarboxylase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000363E9ED
gadB1; glutamate decarboxylase
SCNpilot_BF_INOC_scaffold_165_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1714..2976)
-----------------
DNA (1263bp)
protein (421aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA73_CONWI
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB53168.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Co
SCNpilot_BF_INOC_scaffold_165_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3054..6515)
-----------------
DNA (3462bp)
protein (1154aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexiba
DNA polymerase III, alpha subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G3_CONWI
DNA polymerase III subunit alpha
SCNpilot_BF_INOC_scaffold_165_6
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6685..7482)
-----------------
DNA (798bp)
protein (266aa)
Enoyl-CoA dehydratase EchA8_3 n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YTH9_MYCSD
echA8_3; enoyl-CoA dehydratase EchA8_3
Enoyl-CoA dehydratase EchA8_3 {ECO:0000313|EMBL:AEF36174.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM
SCNpilot_BF_INOC_scaffold_165_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7592..8038
-----------------
DNA (447bp)
protein (149aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC45_CONWI
phosphohistidine phosphatase, SixA
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ADB53340.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sour
SCNpilot_BF_INOC_scaffold_165_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8016..8402)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWL3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62609.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SCNpilot_BF_INOC_scaffold_165_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8402..9022)
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWY1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62608.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_165_10
uncultured Frankia sp., Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9065..10090)
-----------------
DNA (1026bp)
protein (342aa)
Metalloendopeptidase n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WDG3_BACSK
CAZy families GH23 protein {ECO:0000313|EMBL:AIA84255.1}; TaxID=181582 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; environmental samples.;" source="uncultured Frankia sp.;"
metalloprotease
SCNpilot_BF_INOC_scaffold_165_11
unknown

Not on your lists

comp(10216..10395)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_165_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10424..11695)
-----------------
DNA (1272bp)
protein (424aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G7_CONWI
SCNpilot_BF_INOC_scaffold_165_13
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11692..12165)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ67386.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinoco
Uncharacterized protein id=2189846 bin=GWB2_Geobacter-like_52_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
SCNpilot_BF_INOC_scaffold_165_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12179..13375)
-----------------
DNA (1197bp)
protein (399aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=469383 species="Bacteria; Acti
Acetylornithine aminotransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G9_CONWI
acetylornithine and succinylornithine aminotransferase
SCNpilot_BF_INOC_scaffold_165_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13372..14271)
-----------------
DNA (900bp)
protein (300aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H0_CONWI
acetylglutamate kinase
SCNpilot_BF_INOC_scaffold_165_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14315..15514)
-----------------
DNA (1200bp)
protein (400aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H1_CONWI
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
SCNpilot_BF_INOC_scaffold_165_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15511..16563)
-----------------
DNA (1053bp)
protein (351aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H2_CONWI
SCNpilot_BF_INOC_scaffold_165_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16556..19075)
-----------------
DNA (2520bp)
protein (840aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H3_CONWI
SCNpilot_BF_INOC_scaffold_165_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(19072..20139)
-----------------
DNA (1068bp)
protein (356aa)
phenylalanyl-tRNA synthetase, subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H4_CONWI
SCNpilot_BF_INOC_scaffold_165_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20171..20887)
-----------------
DNA (717bp)
protein (239aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H5_CONWI
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADB52035.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conex
SCNpilot_BF_INOC_scaffold_165_21
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20989..21348)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L20 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H6_CONWI
ribosomal protein L20 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L20
SCNpilot_BF_INOC_scaffold_165_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(21349..21558)
-----------------
DNA (210bp)
protein (70aa)
50S ribosomal protein L35 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H7_CONWI
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Con
SCNpilot_BF_INOC_scaffold_165_23
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21705..22796
-----------------
DNA (1092bp)
protein (364aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDF9_DESAR
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:GAO02995.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
SCNpilot_BF_INOC_scaffold_165_24
unknown

Not on your lists

comp(22930..23181)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_165_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(23184..23837)
-----------------
DNA (654bp)
protein (218aa)
Tax=RBG_16_Actinobacteria_67_10_curated
SCNpilot_BF_INOC_scaffold_165_26
unknown

Not on your lists

comp(23828..24529)
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_165_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25058..25783)
-----------------
DNA (726bp)
protein (242aa)
Translation initiation factor IF-3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H9_CONWI
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibactera
SCNpilot_BF_INOC_scaffold_165_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25949..27871)
-----------------
DNA (1923bp)
protein (641aa)
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0I0_CONWI
SCNpilot_BF_INOC_scaffold_165_29
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27890..28906)
-----------------
DNA (1017bp)
protein (339aa)
alpha/beta hydrolase n=1 Tax=Amycolatopsis methanolica RepID=UPI000382D64F
esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:AIJ26749.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_BF_INOC_scaffold_165_30
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28994..30379
-----------------
DNA (1386bp)
protein (462aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI000374059E
Uncharacterized protein {ECO:0000313|EMBL:AKH82029.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
integral membrane protein
Displaying items 1-30 of 407 in total

View Taxonomy