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SCNpilot_BF_INOC_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_31_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3..1280)
DNA (1278bp) protein (426aa)
Protein translocase subunit SecA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F917_CONWI
preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacterace
SCNpilot_BF_INOC_scaffold_31_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1520..1888)
DNA (369bp) protein (123aa)
Ribosome hibernation protein YhbH n=1 Tax=Patulibacter medicamentivorans RepID=H0E4J0_9ACTN
Ribosome hibernation protein YhbH {ECO:0000313|EMBL:EHN11396.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patul
sigma 54 modulation protein/ribosomal protein S30EA
SCNpilot_BF_INOC_scaffold_31_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2009..2653)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V169_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87595.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
competence protein F
SCNpilot_BF_INOC_scaffold_31_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2811..3815)
DNA (1005bp) protein (335aa)
nucleotidyl transferase n=1 Tax=Patulibacter americanus RepID=UPI0003B67345
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ADB53016.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
SCNpilot_BF_INOC_scaffold_31_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3827..4801)
DNA (975bp) protein (325aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:ADB53025.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ADB53025.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubr
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F930_CONWI
SCNpilot_BF_INOC_scaffold_31_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4794..5774)
DNA (981bp) protein (327aa)
Nucleotidyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F931_CONWI
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ADB53026.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
SCNpilot_BF_INOC_scaffold_31_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5794..7086)
DNA (1293bp) protein (431aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADB53027.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADB53027.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexiba
Nucleotide sugar dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F932_CONWI
SCNpilot_BF_INOC_scaffold_31_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7092..9203)
DNA (2112bp) protein (704aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F933_CONWI
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:ADB53028.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
SCNpilot_BF_INOC_scaffold_31_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9208..10311)
DNA (1104bp) protein (368aa)
Peptidase M20 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F934_CONWI
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ADB53029.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strai
SCNpilot_BF_INOC_scaffold_31_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10382..10795)
DNA (414bp) protein (138aa)
ATP synthase epsilon chain n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F935_CONWI
ATP synthase F1 subunit epsilon
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
SCNpilot_BF_INOC_scaffold_31_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10810..12228)
DNA (1419bp) protein (473aa)
ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
F0F1 ATP synthase subunit beta n=1 Tax=Patulibacter americanus RepID=UPI0003B740CC
SCNpilot_BF_INOC_scaffold_31_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12262..13182)
DNA (921bp) protein (307aa)
ATP synthase gamma chain n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F937_CONWI
ATP synthase F1 subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=4693
SCNpilot_BF_INOC_scaffold_31_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13223..14860)
DNA (1638bp) protein (546aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F938_CONWI
SCNpilot_BF_INOC_scaffold_31_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14878..15411)
DNA (534bp) protein (178aa)
ATP synthase subunit delta n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F939_CONWI
ATP synthase F1 subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
SCNpilot_BF_INOC_scaffold_31_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15411..16001)
DNA (591bp) protein (197aa)
ATP synthase subunit b n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F940_CONWI
ATP synthase F0 subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
SCNpilot_BF_INOC_scaffold_31_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16008..16277)
DNA (270bp) protein (90aa)
ATP synthase C chain n=1 Tax=Patulibacter medicamentivorans RepID=H0E4H3_9ACTN
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter m
ATP synthase F0 C subunit
SCNpilot_BF_INOC_scaffold_31_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16293..17252)
DNA (960bp) protein (320aa)
ATP synthase subunit a n=1 Tax=Patulibacter medicamentivorans RepID=H0E4H2_9ACTN
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
ATP synthase F0 subunit alpha
SCNpilot_BF_INOC_scaffold_31_18
unknown

Not on your lists

comp(17252..17647)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_31_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17798..18883)
DNA (1086bp) protein (362aa)
Glycosyl transferase, family 4, conserved region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F946_CONWI
glycosyl transferase, family 4, conserved region
Glycosyl transferase, family 4, conserved region {ECO:0000313|EMBL:ADB53041.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
SCNpilot_BF_INOC_scaffold_31_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19028..20038)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F438_CONWI
hypothetical protein; K09726 hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_31_21
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20085..21353)
DNA (1269bp) protein (423aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYT5_RUBXD
SCNpilot_BF_INOC_scaffold_31_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21447..21893)
DNA (447bp) protein (149aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F948_CONWI
RpiB/LacA/LacB family sugar-phosphate isomerase
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:ADB53043.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
SCNpilot_BF_INOC_scaffold_31_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21948..22769
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E551_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11190.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
SCNpilot_BF_INOC_scaffold_31_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22766..23392)
DNA (627bp) protein (209aa)
tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Patulibacter americanus RepID=UPI0003B380F7
SUA5/yciO/yrdC domain-containing protein
SUA5/yciO/yrdC domain protein {ECO:0000313|EMBL:ADB53046.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
SCNpilot_BF_INOC_scaffold_31_25
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23389..24246)
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
modification methylase HemK n=1 Tax=Patulibacter americanus RepID=UPI0003B55C9A
protein-(glutamine-N5) methyltransferase
SCNpilot_BF_INOC_scaffold_31_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(24249..25313)
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F953_CONWI
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Sol
SCNpilot_BF_INOC_scaffold_31_27
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

25438..25995
DNA (558bp) protein (186aa)
RNA polymerase n=1 Tax=Patulibacter americanus RepID=UPI0003B3CB95
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EHN12047.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_31_28
unknown

Not on your lists

25992..26987
DNA (996bp) protein (332aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_31_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(26992..27990)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E4G1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11413.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
putative metal-dependent enzyme
SCNpilot_BF_INOC_scaffold_31_30
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(28026..28256)
DNA (231bp) protein (77aa)
50S ribosomal protein L31 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M176_ACIFD
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrim
50S ribosomal protein L31
Displaying items 1-30 of 493 in total

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