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SCNpilot_BF_INOC_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 852 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_68_1
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..384
DNA (384bp) protein (128aa)
coxB; cytochrome c oxidase, subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
Cytochrome c oxidase subunit 2 n=1 Tax=Burkholderia multivorans CF2 RepID=J4JH92_9BURK
SCNpilot_BF_INOC_scaffold_68_2
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

432..749
DNA (318bp) protein (106aa)
Aromatic aminotransferase n=5 Tax=Burkholderia mallei RepID=A1V2P5_BURMS
aminotransferase
Aromatic aminotransferase {ECO:0000313|EMBL:ABN02173.1}; TaxID=412022 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" sour
SCNpilot_BF_INOC_scaffold_68_3
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

716..1549
DNA (834bp) protein (278aa)
Putative aminotransferase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=I6AMW3_BURTH
Aminotransferase class-V family protein {ECO:0000313|EMBL:KGS03024.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomalle
aminotransferase class-V family protein
SCNpilot_BF_INOC_scaffold_68_4
unknown

Not on your lists

1814..2992
DNA (1179bp) protein (393aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_68_5

Not on your lists

comp(3127..3540)
DNA (414bp) protein (138aa)
Putative peptide chain release factor n=1 Tax=mine drainage metagenome RepID=E6PMS2_9ZZZZ
Putative peptide chain release factor {ECO:0000313|EMBL:CBH96224.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
class I peptide chain release factor
SCNpilot_BF_INOC_scaffold_68_6
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3537..4562)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDH2_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:KGF70996.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
patatin
SCNpilot_BF_INOC_scaffold_68_7
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4659..5660
DNA (1002bp) protein (334aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HI74_ACTM4
putative tryptophanyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_68_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6218..8500
DNA (2283bp) protein (761aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=323097 species="Bacteria; Proteobacteria; Alph
Aconitase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGB3_NITHX
aconitate hydratase 1
SCNpilot_BF_INOC_scaffold_68_9
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8812..9603
DNA (792bp) protein (264aa)
hypothetical protein n=2 Tax=candidate division EM 19 RepID=UPI00036EC8AD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral tax
sigF; RNA polymerase Sigma-F factor
SCNpilot_BF_INOC_scaffold_68_10
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9689..10792)
DNA (1104bp) protein (368aa)
amino acid oxidase n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002F6D624
putative FAD dependent oxidoreductase rbh
Putative FAD dependent oxidoreductase {ECO:0000313|EMBL:AJE81647.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
SCNpilot_BF_INOC_scaffold_68_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(10818..11693)
DNA (876bp) protein (292aa)
Amino acid permease-associated region n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIW9_NAKMY
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ACV76556.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (s
SCNpilot_BF_INOC_scaffold_68_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11769..12086)
DNA (318bp) protein (106aa)
Zinc finger UBP-type protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EAF9_9ACTN
Zinc finger UBP-type protein {ECO:0000313|EMBL:EHN09286.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_68_13
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12171..14072)
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00035FC843
Putative hydrolase {ECO:0000313|EMBL:AKB27142.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sicili
beta-lactamase
SCNpilot_BF_INOC_scaffold_68_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14069..14917)
DNA (849bp) protein (283aa)
rrmA; rRNA guanine-N1-methyltransferase (EC:2.1.1.51)
rRNA guanine-N1-methyltransferase {ECO:0000313|EMBL:CAM01304.1}; EC=2.1.1.51 {ECO:0000313|EMBL:CAM01304.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Sacc
rRNA guanine-N1-methyltransferase n=2 Tax=Saccharopolyspora erythraea RepID=A4FB79_SACEN
SCNpilot_BF_INOC_scaffold_68_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15119..16813
DNA (1695bp) protein (565aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBS6_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB51341.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.
SCNpilot_BF_INOC_scaffold_68_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16810..18567
DNA (1758bp) protein (586aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBS5_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB51340.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexiba
SCNpilot_BF_INOC_scaffold_68_17
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(18573..19268)
DNA (696bp) protein (232aa)
PREDICTED: uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 n=1 Tax=Danio rerio RepID=UPI0003835B67
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo9g008630.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons;
hypothetical protein
SCNpilot_BF_INOC_scaffold_68_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19491..20150)
DNA (660bp) protein (220aa)
portal protein n=1 Tax=Patulibacter americanus RepID=UPI0003B53B1D
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ADB51331.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woese
SCNpilot_BF_INOC_scaffold_68_19

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comp(20151..20576)
DNA (426bp) protein (142aa)
potassium transporter TrkA n=1 Tax=Patulibacter americanus RepID=UPI0003B3583F
Uncharacterized protein {ECO:0000313|EMBL:KKK46602.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TrkA-N domain-containing protein
SCNpilot_BF_INOC_scaffold_68_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20586..22523)
DNA (1938bp) protein (646aa)
UspA domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBR4_CONWI
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADB51329.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei
SCNpilot_BF_INOC_scaffold_68_21
unknown

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comp(22520..22729)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_68_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22726..24630)
DNA (1905bp) protein (635aa)
UspA domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBR2_CONWI
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADB51327.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei
SCNpilot_BF_INOC_scaffold_68_23
unknown

Not on your lists

comp(24642..25106)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_68_24
Patulibacter americanus, Patulibacter, Solirubrobacterales, Rubrobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25136..26758)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B58635
SCNpilot_BF_INOC_scaffold_68_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26833..28260)
DNA (1428bp) protein (476aa)
Phosphate ABC transporter substrate-binding protein, PhoT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK7_NOCSJ
phosphate ABC transporter periplasmic component-like protein rbh
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:ABL80242.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae;
SCNpilot_BF_INOC_scaffold_68_26
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28257..29531)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80243.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp.
SCNpilot_BF_INOC_scaffold_68_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29531..31492)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80245.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 /
SCNpilot_BF_INOC_scaffold_68_28
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31492..33714)
DNA (2223bp) protein (741aa)
glycosyl transferase n=1 Tax=Patulibacter americanus RepID=UPI0003B310B4
general secretion pathway protein E rbh
General secretory system II, protein E domain protein {ECO:0000313|EMBL:ABL80246.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocar
SCNpilot_BF_INOC_scaffold_68_29
unknown

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comp(33714..33944)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_68_30
unknown

Not on your lists

comp(33941..34474)
DNA (534bp) protein (178aa)

This feature has no annotations

Displaying items 1-30 of 852 in total

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