ggKbase home page

SCNpilot_BF_INOC_scaffold_1226

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1226_1
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121..762
DNA (642bp) protein (214aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AQK0_PSEAI
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1226_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(978..1949)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000311250F
Uncharacterized protein {ECO:0000313|EMBL:KJA10220.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
Tricarboxylate transport protein TctC
SCNpilot_BF_INOC_scaffold_1226_3
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2074..3060)
DNA (987bp) protein (329aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:CDS54100.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDS54100.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Po
Zinc-binding dehydrogenase n=4 Tax=Bordetella RepID=K0MDE6_BORPB
zinc-binding dehydrogenase rbh
SCNpilot_BF_INOC_scaffold_1226_4
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..3711
DNA (570bp) protein (190aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=365046 sp
Putative 3-methyladenine DNA glycosylase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4S1_RAMTT
3-methyladenine DNA glycosylase
SCNpilot_BF_INOC_scaffold_1226_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3840..5897)
DNA (2058bp) protein (686aa)
Calcium-binding EF-hand-containing protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5D0_ACIDE
Calcium-binding EF-hand-containing protein {ECO:0000313|EMBL:EER60315.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
Na+/solute symporter
SCNpilot_BF_INOC_scaffold_1226_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5899..6153)
DNA (255bp) protein (85aa)
Na+/solute symporter n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WD7_RHOFD
Na+/solute symporter; K14393 cation/acetate symporter Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Na+/solute symporter
SCNpilot_BF_INOC_scaffold_1226_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6178..8565)
DNA (2388bp) protein (796aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase n=2 Tax=Acidovorax RepID=A1W9U5_ACISJ
SCNpilot_BF_INOC_scaffold_1226_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8592..9494
DNA (903bp) protein (301aa)
PEP synthetase regulatory protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036F08D4
PEP synthetase regulatory protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1226_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9612..10016)
DNA (405bp) protein (135aa)
UPI0003D3C7E4 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3C7E4
Uncharacterized protein {ECO:0000313|EMBL:GAD22171.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1226_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10164..10865
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128S2_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE44970.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_1226_11
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11274..13211)
DNA (1938bp) protein (646aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W82_RHOFD
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_BF_INOC_scaffold_1226_12
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13391..13663)
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6U1_9BURK
nucleoid protein Hbs; K03530 DNA-binding protein HU-beta Tax=GWA2_Curvibacter_64_110_curated
dbhB; DNA-binding protein HU-beta
SCNpilot_BF_INOC_scaffold_1226_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13970..14887)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E1132B
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1226_14
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14895..15461)
DNA (567bp) protein (189aa)
cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG66_ACIET
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EXU78649.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; C
SCNpilot_BF_INOC_scaffold_1226_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15588..17573)
DNA (1986bp) protein (662aa)
excinuclease ABC subunit C n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F4DCF
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit c
SCNpilot_BF_INOC_scaffold_1226_16
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17620..18333
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X9X8_VARPD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1226_17
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18365..18667
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1W6_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93550.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_1226_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18803..19357
DNA (555bp) protein (185aa)
Elongation factor P n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGX1_9BURK
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
translation elongation factor P
SCNpilot_BF_INOC_scaffold_1226_19
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19454..20326
DNA (873bp) protein (291aa)
TIGR00730 family protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U2N9_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1226_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20349..21002)
DNA (654bp) protein (218aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Variovorax sp. CF313 RepID=J2KYJ0_9BURK
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
outer membrane lipoprotein carrier protein LolA
SCNpilot_BF_INOC_scaffold_1226_21
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21071..21718)
DNA (648bp) protein (216aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y785_9BURK
SCNpilot_BF_INOC_scaffold_1226_22
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21817..22431)
DNA (615bp) protein (205aa)
50S ribosomal protein L25 n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023768B3
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
SCNpilot_BF_INOC_scaffold_1226_23
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22529..23506)
DNA (978bp) protein (326aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T373_ACIDE
SCNpilot_BF_INOC_scaffold_1226_24
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23709..24566)
DNA (858bp) protein (286aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0Z7_ALIDB
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1226_25
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24578..25027)
DNA (450bp) protein (150aa)
Putative lipoprotein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKP0_POLNA
putative lipoprotein
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;"
SCNpilot_BF_INOC_scaffold_1226_26
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25072..26856)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYS1_RAMTT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1226_27
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26889..27704
DNA (816bp) protein (272aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYS0_RAMTT
mutM; formamidopyrimidine-DNA glycosylase
SCNpilot_BF_INOC_scaffold_1226_28
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27801..29765
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYR9_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94436.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_1226_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29762..30805
DNA (1044bp) protein (348aa)
mutY; A/G-specific adenine glycosylase MutY (EC:3.2.2.-)
A/G-specific adenine glycosylase MutY {ECO:0000313|EMBL:AGU51578.1}; EC=3.2.2.- {ECO:0000313|EMBL:AGU51578.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
A/G-specific adenine glycosylase MutY n=1 Tax=Variovorax paradoxus B4 RepID=T1XGC0_VARPD
SCNpilot_BF_INOC_scaffold_1226_30
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30900..32168)
DNA (1269bp) protein (423aa)
UPF0761 membrane protein Veis_3782 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=Y3782_VEREI
putative ribonuclease BN
UPF0761 membrane protein Veis_3782 {ECO:0000255|HAMAP-Rule:MF_00672}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="
Displaying items 1-30 of 60 in total

View Taxonomy