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SCNpilot_BF_INOC_scaffold_1280

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1280_31
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29985..30845
DNA (861bp) protein (287aa)
membrane protein id=5083508 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
membrane protein Tax=GWE1_Burkholderiales_65_30_curated
membrane protein
SCNpilot_BF_INOC_scaffold_1280_32
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30961..32334)
DNA (1374bp) protein (458aa)
tryptophanase (EC:4.1.99.1)
Tryptophanase {ECO:0000313|EMBL:ADV00851.1}; EC=4.1.99.1 {ECO:0000313|EMBL:ADV00851.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
Tryptophanase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYF3_ALIDB
SCNpilot_BF_INOC_scaffold_1280_33
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32516..33343)
DNA (828bp) protein (276aa)
PTS system, enzyme I component; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000318576E
SCNpilot_BF_INOC_scaffold_1280_34
unknown

Not on your lists

33454..33840
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1280_35
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34208..34477)
DNA (270bp) protein (90aa)
Phosphocarrier protein n=2 Tax=Delftia acidovorans RepID=S2X196_DELAC
Phosphocarrier protein {ECO:0000313|EMBL:EPD38817.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 1
phosphotransferase system, phosphocarrier protein HPr
SCNpilot_BF_INOC_scaffold_1280_36
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34474..34893)
DNA (420bp) protein (140aa)
PTS fructose transporter subunit IIA n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AAA36
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:GAD21801.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
pts system fructose subfamily iia component
SCNpilot_BF_INOC_scaffold_1280_37
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34905..36173)
DNA (1269bp) protein (423aa)
major facilitator transporter n=1 Tax=Acidovorax radicis RepID=UPI0002377C93
transporter Tax=GWA2_Curvibacter_64_110_curated
major facilitator superfamily transporter
SCNpilot_BF_INOC_scaffold_1280_38
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36170..36874)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003091B15
Uncharacterized protein {ECO:0000313|EMBL:EER59991.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
hypothetical protein
SCNpilot_BF_INOC_scaffold_1280_39
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36906..38141
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5A2_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG91412.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_1280_40
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38304..39035
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031E2BC0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG91411.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_1280_41
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39102..39626
DNA (525bp) protein (175aa)
Redoxin domain protein n=2 Tax=cellular organisms RepID=A9BPT2_DELAS
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:AEF87458.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4)
SCNpilot_BF_INOC_scaffold_1280_42
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39751..40212)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WE54_DELAC
cytochrome c prime
Cytochrome c {ECO:0000313|EMBL:KFJ13882.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acid
SCNpilot_BF_INOC_scaffold_1280_43
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40418..41092
DNA (675bp) protein (225aa)
Cytochrome B561 n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IXG9_COMT2
Cytochrome B561 {ECO:0000313|EMBL:KGH09948.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomona
cytochrome B561
SCNpilot_BF_INOC_scaffold_1280_44
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41147..41644
DNA (498bp) protein (166aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTY2_9BURK
N-acetyltransferase GCN5
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AFU44107.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. K
SCNpilot_BF_INOC_scaffold_1280_45
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41764..42270)
DNA (507bp) protein (169aa)
Redoxin domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVI7_ALIDB
redoxin domain-containing protein
Thioredoxin fold-haboring protein {ECO:0000313|EMBL:GAO26103.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
SCNpilot_BF_INOC_scaffold_1280_46
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(42411..42680)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVI6_ALIDB
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycl
SCNpilot_BF_INOC_scaffold_1280_47
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(42690..42887)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=RL29_VEREI
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
50S ribosomal protein L29
SCNpilot_BF_INOC_scaffold_1280_48
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(42904..43320)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Limnohabitans RepID=UPI0002F7D1FB
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramliba
SCNpilot_BF_INOC_scaffold_1280_49
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(43323..44222)
DNA (900bp) protein (300aa)
30S ribosomal protein S3 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y592_RAMTT
rpsC; 30S ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tata
SCNpilot_BF_INOC_scaffold_1280_50
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(44242..44580)
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y591_RAMTT
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramliba
SCNpilot_BF_INOC_scaffold_1280_51
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(44590..44865)
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW82_9BURK
rpsS; 30S ribosomal protein S19
rpsS; 30S ribosomal protein S19 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_BF_INOC_scaffold_1280_52
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(44878..45702)
DNA (825bp) protein (275aa)
rplB; 50S ribosomal protein L2 id=12553582 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rplB; 50S ribosomal protein L2
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1280_53
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(45706..46041)
DNA (336bp) protein (112aa)
50S ribosomal protein L23 n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B37D
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tat
SCNpilot_BF_INOC_scaffold_1280_54
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(46038..46658)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQL0_9BURK
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella grac
rplD; 50S ribosomal protein L4
SCNpilot_BF_INOC_scaffold_1280_55
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(46658..47338)
DNA (681bp) protein (227aa)
50S ribosomal protein L3 n=1 Tax=Comamonas sp. B-9 RepID=UPI000395CC86
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamon
SCNpilot_BF_INOC_scaffold_1280_56
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(47521..47832)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y585_RAMTT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temper
rpsJ; 30S ribosomal protein S10
SCNpilot_BF_INOC_scaffold_1280_57
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47844..47945)
DNA (102bp) protein (34aa)
Elongation factor Tu n=1 Tax=Ralstonia sp. 5_2_56FAA RepID=T2N055_9RALS
tuf; translation elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=320373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
Displaying items 31-57 of 57 in total

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