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SCNpilot_BF_INOC_scaffold_1280

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1280_1
Vibrio rumoiensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..537
DNA (537bp) protein (179aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=76258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source=
catalase n=1 Tax=Brachymonas chironomi RepID=UPI0003703CA7
hypothetical protein
SCNpilot_BF_INOC_scaffold_1280_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

630..1061
DNA (432bp) protein (144aa)
Ferritin, Dps family protein n=2 Tax=Acidovorax RepID=A1W305_ACISJ
Ferritin, Dps family protein
Ferritin Dps family protein {ECO:0000313|EMBL:ACM31853.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
SCNpilot_BF_INOC_scaffold_1280_3
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1249..1899)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TB77_ACIDE
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
acrR; transcriptional regulator AcrR
SCNpilot_BF_INOC_scaffold_1280_4
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2132..3415
DNA (1284bp) protein (428aa)
membrane protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003954E52
secretion protein HlyD; K03585 membrane fusion protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
RND family efflux transporter MFP subunit
SCNpilot_BF_INOC_scaffold_1280_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3428..6682
DNA (3255bp) protein (1085aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAS9_ACIDE
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:EER58419.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
hydrophobe/amphiphile efflux-1 (HAE1) family protein
SCNpilot_BF_INOC_scaffold_1280_6
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6679..8187
DNA (1509bp) protein (503aa)
RND efflux system, outer membrane lipoprotein, NodT family (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAS8_ACIDE
RND efflux system outer membrane lipoprotein NodT Tax=GWA2_Curvibacter_64_110_curated
RND efflux system outer membrane lipoprotein NodT
SCNpilot_BF_INOC_scaffold_1280_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8310..9185
DNA (876bp) protein (292aa)
Cytochrome c, class I n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ54_ACIAC
class I cytochrome c Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
class I cytochrome c
SCNpilot_BF_INOC_scaffold_1280_8
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9314..9856)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035F48E0
hypothetical protein Tax=GWA2_Curvibacter_64_110_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1280_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10425..10871)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5D8_RAMTT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1280_10
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11018..11641
DNA (624bp) protein (208aa)
LemA family protein n=1 Tax=Variovorax paradoxus RepID=UPI0003620BD9
hypothetical protein; K03744 LemA protein Tax=CG_Rhodof_03
lema family protein
SCNpilot_BF_INOC_scaffold_1280_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11679..12602
DNA (924bp) protein (308aa)
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5D5_RAMTT
membrane protein
Candidate membrane protein {ECO:0000313|EMBL:AEG91445.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataou
SCNpilot_BF_INOC_scaffold_1280_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12605..13144
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GP8_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE42294.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_1280_13
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13179..13787)
DNA (609bp) protein (203aa)
Cyclic nucleotide-binding domain-containing protein id=1278700 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
cyclic nucleotide-binding domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1280_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13901..14320)
DNA (420bp) protein (140aa)
ATP synthase epsilon chain n=2 Tax=Acidovorax RepID=ATPE_ACIET
atpC; F0F1 ATP synthase subunit epsilon
ATP synthase epsilon chain {ECO:0000255|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000255|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000255|HAMAP-Rule:MF_00530}; TaxI
SCNpilot_BF_INOC_scaffold_1280_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14416..15087)
DNA (672bp) protein (224aa)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
F0F1 ATP synthase subunit beta n=1 Tax=Brachymonas chironomi RepID=UPI00037BC7BB
f0f1 ATP synthase subunit beta
SCNpilot_BF_INOC_scaffold_1280_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15089..15760)
DNA (672bp) protein (224aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=2 Tax=Alicycliphilus denitrificans RepID=E8TVK5_ALIDB
ATP synthase F1 subunit beta
SCNpilot_BF_INOC_scaffold_1280_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15798..16676)
DNA (879bp) protein (293aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.15)
F0F1 ATP synthase subunit gamma n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A21BB
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1268
SCNpilot_BF_INOC_scaffold_1280_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16703..18316)
DNA (1614bp) protein (538aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.6.3.15)
ATP synthase subunit alpha n=1 Tax=Variovorax sp. CF313 RepID=J3CTN1_9BURK
SCNpilot_BF_INOC_scaffold_1280_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18367..18897)
DNA (531bp) protein (177aa)
atpH; ATP synthase, subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJP4_9BURK
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
SCNpilot_BF_INOC_scaffold_1280_20
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18930..19400)
DNA (471bp) protein (157aa)
F0F1 ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=GWA2_Curvibacter_64_110_curated
F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQP9_9BURK
SCNpilot_BF_INOC_scaffold_1280_21
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19437..19685)
DNA (249bp) protein (83aa)
F-ATPase, C chain; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=GWA2_Curvibacter_64_110_curated
F0F1 ATP synthase subunit C n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQP8_9BURK
F-ATPase, C chain
SCNpilot_BF_INOC_scaffold_1280_22
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19744..20622)
DNA (879bp) protein (293aa)
ATP synthase subunit a n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5B6_RAMTT
F-ATPase, A chain
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
SCNpilot_BF_INOC_scaffold_1280_23
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20626..21171)
DNA (546bp) protein (182aa)
ATP synthase subunit I n=1 Tax=Acidovorax avenae RepID=UPI00036A5DB5
ATP synthase subunit I; K02116 ATP synthase protein I Tax=GWA2_Curvibacter_64_110_curated
putative ATP synthase protein I
SCNpilot_BF_INOC_scaffold_1280_24
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21332..22240
DNA (909bp) protein (303aa)
branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase (EC:2.6.1.-)
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase {ECO:0000313|EMBL:ABE42282.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABE42282.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betapr
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GR0_POLSJ
SCNpilot_BF_INOC_scaffold_1280_25
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22237..22521
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DE2D4
UPF0250 protein AZ34_00530 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella g
hypothetical protein
SCNpilot_BF_INOC_scaffold_1280_26
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22606..24264
DNA (1659bp) protein (553aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD74_ACISJ
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_BF_INOC_scaffold_1280_27
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24269..25081
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ76427.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Putative uncharacterized protein id=4578307 bin=GWF2_Lentisphaerae_57_35 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
SCNpilot_BF_INOC_scaffold_1280_28
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25271..27961
DNA (2691bp) protein (897aa)
Type III restriction enzyme, res subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD73_ACISJ
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KJA11702.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
type III restriction enzyme, res subunit
SCNpilot_BF_INOC_scaffold_1280_29
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27958..28656
DNA (699bp) protein (233aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJQ1_9BURK
lipoate-protein ligase B
SCNpilot_BF_INOC_scaffold_1280_30
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28782..29756
DNA (975bp) protein (325aa)
MFS transporter n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QXZ3_RALPI
MFS transporter
MFS transporter {ECO:0000313|EMBL:AGW95784.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.
Displaying items 1-30 of 57 in total

View Taxonomy