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SCNpilot_BF_INOC_scaffold_1592

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1592_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1504
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036F6B1E
ribonuclease Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ribonuclease
SCNpilot_BF_INOC_scaffold_1592_2
Neisseria shayeganii, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1581..2465
DNA (885bp) protein (295aa)
Cell wall endopeptidase, family M23/M37 {ECO:0000313|EMBL:EGY53753.1}; EC=3.4.24.75 {ECO:0000313|EMBL:EGY53753.1};; TaxID=1032488 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; N
Cell wall endopeptidase, family M23/M37 n=1 Tax=Neisseria shayeganii 871 RepID=G4CEM5_9NEIS
peptidase M23B
SCNpilot_BF_INOC_scaffold_1592_3
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2472..2906
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Eikenella corrodens CC92I RepID=V7IDJ1_EIKCO
Uncharacterized protein {ECO:0000313|EMBL:ETA82927.1}; TaxID=1073362 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella.;" source="Eikenella corrodens CC92I.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1592_4
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3168..3737
DNA (570bp) protein (190aa)
Alkyl hydroperoxide reductase subunit C n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6STV3_JANMA
ahpC; alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase subunit C {ECO:0000313|EMBL:ABR89709.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" sourc
SCNpilot_BF_INOC_scaffold_1592_5
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3989..5578
DNA (1590bp) protein (530aa)
Alkyl hydroperoxide reductase, F52a subunit,FAD/NAD(P)-binding {ECO:0000313|EMBL:CDI03264.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CDI03264.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteob
Alkyl hydroperoxide reductase, F subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAP7_ACIDE
alkyl hydroperoxide reductase subunit F
SCNpilot_BF_INOC_scaffold_1592_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5647..6498)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00038120B8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM38302.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
SCNpilot_BF_INOC_scaffold_1592_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6553..8106)
DNA (1554bp) protein (518aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E08F2
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
virulence factor
SCNpilot_BF_INOC_scaffold_1592_8
unknown

Not on your lists

8151..8285
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1592_9
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8402..8707
DNA (306bp) protein (102aa)
30S ribosomal protein S20 n=2 Tax=Acidovorax RepID=RS20_ACIAC
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avena
SCNpilot_BF_INOC_scaffold_1592_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8829..10331)
DNA (1503bp) protein (501aa)
RND efflux system outer membrane lipoprotein NodT n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ61_THIDA
RND efflux system outer membrane lipoprotein NodT
RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:AAZ97309.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
SCNpilot_BF_INOC_scaffold_1592_11
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10318..10779)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2C3K2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ENO98802.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1592_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10974..11702)
DNA (729bp) protein (243aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZY5_ALIDB
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU99870.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_BF_INOC_scaffold_1592_13

Not on your lists

comp(11689..11970)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DI00_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97031.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter permease
SCNpilot_BF_INOC_scaffold_1592_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12809..13960)
DNA (1152bp) protein (384aa)
HlyD family secretion protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPG7_9GAMM
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:CBL46709.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_BF_INOC_scaffold_1592_15
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13957..14544)
DNA (588bp) protein (196aa)
TetR family transcriptional regulator n=1 Tax=Thauera terpenica 58Eu RepID=S9ZDN9_9RHOO
TetR family transcriptional regulator {ECO:0000313|EMBL:EPZ15410.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terp
regulatory protein tetr
SCNpilot_BF_INOC_scaffold_1592_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14783..16201)
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD61_ACISJ
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1592_17
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16198..16872)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC0_ACIET
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACM34858.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
SCNpilot_BF_INOC_scaffold_1592_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16872..17204)
DNA (333bp) protein (111aa)
Propeptide PepSY amd peptidase M4 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC1_ACIET
propeptide pepsy amd peptidase m4
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:ACM34859.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
SCNpilot_BF_INOC_scaffold_1592_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17294..17617
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO21106.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_BF_INOC_scaffold_1592_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17929..18129
DNA (201bp) protein (67aa)
Cytochrome b/b6 domain protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTZ4_9GAMM
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:EIM02936.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
SCNpilot_BF_INOC_scaffold_1592_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18181..18588
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F858D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00596.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_1592_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18615..19094
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM4_ALIDB
hypothetical protein
Tat pathway signal sequence domain-containing protein {ECO:0000313|EMBL:GAO25630.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilu
SCNpilot_BF_INOC_scaffold_1592_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19116..21332
DNA (2217bp) protein (739aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] Tax=GWE1_Burkholderiales_65_30_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] id=5080007 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
oxidoreductase FAD/NAD(P)-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_1592_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21313..22302
DNA (990bp) protein (330aa)
ApbE family lipoprotein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBP5_ALIDK
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:AEB86966.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_BF_INOC_scaffold_1592_25
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22438..22653
DNA (216bp) protein (72aa)
Heavy metal transport/detoxification protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4I8_9RHIZ
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EKF42286.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" so
heavy metal transport/detoxification protein
SCNpilot_BF_INOC_scaffold_1592_26
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22723..24693
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0APS3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14854.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
heavy metal translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_1592_27
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24725..25471
DNA (747bp) protein (249aa)
Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD75_9ALTE
Transcriptional regulator, Crp/Fnr family protein {ECO:0000313|EMBL:EAZ99702.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;"
transcriptional regulator, Crp/Fnr family
SCNpilot_BF_INOC_scaffold_1592_28
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25653..26159
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB2_GALCS
Uncharacterized protein {ECO:0000313|EMBL:EWS62144.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1592_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26149..26826
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MID1_ACIET
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1592_30
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26823..27503
DNA (681bp) protein (227aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MID2_ACIET
cAMP regulatory protein {ECO:0000313|EMBL:EWS55614.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Crp/Fnr family transcriptional regulator
Displaying 30 items

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