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SCNpilot_BF_INOC_scaffold_331

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Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_331_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1222..3135
DNA (1914bp) protein (638aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237716D
monosaccharide-transporting ATPase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
ABC transporter
SCNpilot_BF_INOC_scaffold_331_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3204..3893
DNA (690bp) protein (230aa)
Uncharacterized protein id=1270547 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_331_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3899..5338)
DNA (1440bp) protein (480aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157)
Bifunctional protein GlmU n=2 Tax=Alicycliphilus denitrificans RepID=E8TYV9_ALIDB
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycl
SCNpilot_BF_INOC_scaffold_331_4
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5335..5958)
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXM6_RAMTT
TetR family transcriptional regulator Tax=GWA2_Curvibacter_64_110_curated
TetR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_331_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6084..7361)
DNA (1278bp) protein (426aa)
Multifunctional CCA protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXA3_ALIDB
polynucleotide adenylyltransferase
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicy
SCNpilot_BF_INOC_scaffold_331_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7494..8984
DNA (1491bp) protein (497aa)
FeS assembly protein SufB n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC75_ACIET
cysteine desulfurase activator complex subunit sufb
FeS assembly protein SufB {ECO:0000313|EMBL:ACM33780.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (s
SCNpilot_BF_INOC_scaffold_331_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9066..9836
DNA (771bp) protein (257aa)
FeS assembly ATPase SufC n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GES1_ALIDK
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AEB84957.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
SCNpilot_BF_INOC_scaffold_331_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9838..11067
DNA (1230bp) protein (410aa)
SufBD protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQB4_ALIDB
sufbd protein
SufBD protein {ECO:0000313|EMBL:ADV00156.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans
SCNpilot_BF_INOC_scaffold_331_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11125..12393
DNA (1269bp) protein (423aa)
SufS subfamily cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=596154 species="Bacteria; Proteob
Cysteine desulfurase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GER9_ALIDK
SCNpilot_BF_INOC_scaffold_331_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12390..12851
DNA (462bp) protein (154aa)
SUF system FeS assembly protein, NifU family n=2 Tax=Alicycliphilus denitrificans RepID=E8TQB2_ALIDB
NifU family SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:AEB84954.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
SCNpilot_BF_INOC_scaffold_331_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12848..13402
DNA (555bp) protein (185aa)
FeS assembly SUF system protein SufT n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQB1_ALIDB
fes assembly suf system protein suft
Fes assembly suf system protein suft {ECO:0000313|EMBL:GAO23141.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
SCNpilot_BF_INOC_scaffold_331_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13471..13764)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W9R4_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42989.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_BF_INOC_scaffold_331_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13852..15066)
DNA (1215bp) protein (405aa)
NnrS family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ93_ALIDB
nnrs family protein
NnrS family protein {ECO:0000313|EMBL:ADV00135.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_BF_INOC_scaffold_331_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15188..15871)
DNA (684bp) protein (228aa)
Glutathione S-transferase, N-terminal domain protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUV8_ACIAC
glutathione S-transferase domain-containing protein
Glutathione S-transferase, N-terminal domain protein {ECO:0000313|EMBL:ABM34746.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
SCNpilot_BF_INOC_scaffold_331_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16052..17020)
DNA (969bp) protein (323aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125I6_POLSJ
NAD-dependent epimerase/dehydratase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_331_16
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17097..19202)
DNA (2106bp) protein (702aa)
Lytic transglycosylase, catalytic n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4F6_9BURK
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EHL20513.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
putative lytic murien transglycosylase
SCNpilot_BF_INOC_scaffold_331_17
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19212..19802
DNA (591bp) protein (197aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KS95_9BURK
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_BF_INOC_scaffold_331_18
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19956..21152
DNA (1197bp) protein (399aa)
Polyphosphate kinase 2 {ECO:0000313|EMBL:EFV95734.1}; EC=2.7.4.1 {ECO:0000313|EMBL:EFV95734.1};; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
Polyphosphate kinase 2 n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RVD0_9BURK
hypothetical protein
SCNpilot_BF_INOC_scaffold_331_19
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21300..21836
DNA (537bp) protein (179aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=RUVC_ACIAC
ruvC; Holliday junction resolvase
SCNpilot_BF_INOC_scaffold_331_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22203..23126)
DNA (924bp) protein (308aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-) Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=LPXC_POLSJ
SCNpilot_BF_INOC_scaffold_331_21
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23430..24653)
DNA (1224bp) protein (408aa)
ftsZ; cell division tubulin-like GTPase; K03531 cell division protein FtsZ Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
cell division protein FtsZ; K03531 cell division protein FtsZ id=5080295 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cell division protein FtsZ
SCNpilot_BF_INOC_scaffold_331_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24818..26047)
DNA (1230bp) protein (410aa)
cell division protein FtsA n=1 Tax=Acidovorax avenae RepID=UPI00030A0DAE
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae
SCNpilot_BF_INOC_scaffold_331_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26080..26874)
DNA (795bp) protein (265aa)
cell division protein FtsQ n=1 Tax=Acidovorax radicis RepID=UPI0002375514
polypeptide-transport-associated domain-containing protein
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
SCNpilot_BF_INOC_scaffold_331_24
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26871..27848)
DNA (978bp) protein (326aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZM7_RAMTT
ddlA; D-alanine-D-alanine ligase
SCNpilot_BF_INOC_scaffold_331_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27859..29277)
DNA (1419bp) protein (473aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) id=12551205 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
SCNpilot_BF_INOC_scaffold_331_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29274..30347)
DNA (1074bp) protein (358aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acety
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6U3_ACIDE
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
SCNpilot_BF_INOC_scaffold_331_27
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30344..31615)
DNA (1272bp) protein (424aa)
Lipid II flippase FtsW n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q7Z0_ACIAP
cell division protein FtsW
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
SCNpilot_BF_INOC_scaffold_331_28
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31612..33135)
DNA (1524bp) protein (508aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZM3_RAMTT
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
SCNpilot_BF_INOC_scaffold_331_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33139..34317)
DNA (1179bp) protein (393aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUG3_9BURK
SCNpilot_BF_INOC_scaffold_331_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34307..35716)
DNA (1410bp) protein (470aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUG4_9BURK
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 84 in total

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