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SCNpilot_BF_INOC_scaffold_535

Search features with annotation key words

Displaying items 61-89 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_535_61
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65050..65379)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y246_RAMTT
hypothetical protein; K03210 preprotein translocase subunit YajC Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_535_62
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65638..69243)
DNA (3606bp) protein (1202aa)
Candidate indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y247_RAMTT
indolepyruvate ferredoxin oxidoreductase subunits alpha and beta
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_535_63
unknown

Not on your lists

comp(69428..69898)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_535_64
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69993..71114)
DNA (1122bp) protein (374aa)
MltA domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAG5_9BURK
MltA domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_535_65
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71323..71943)
DNA (621bp) protein (207aa)
LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036B8928
Response regulator {ECO:0000313|EMBL:EJL79739.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
response regulator receiver protein
SCNpilot_BF_INOC_scaffold_535_66
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72049..73239
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24980.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_535_67
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73617..74096)
DNA (480bp) protein (160aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein n=2 Tax=Delftia acidovorans RepID=S2WGQ3_DELAC
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
AsnC family transcriptional regulator
SCNpilot_BF_INOC_scaffold_535_68
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74228..75532
DNA (1305bp) protein (435aa)
D-amino acid dehydrogenase small subunit (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
D-amino acid dehydrogenase small subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWA3_VARPE
fad dependent oxidoreductase
SCNpilot_BF_INOC_scaffold_535_69
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75613..76209)
DNA (597bp) protein (199aa)
Zinc metalloprotease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0C7_9BURK
zinc metalloprotease
Zinc metalloprotease {ECO:0000313|EMBL:AFU46507.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_BF_INOC_scaffold_535_70
unknown

Not on your lists

76381..76701
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_535_71
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77082..78602)
DNA (1521bp) protein (507aa)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395BE75
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EHL24776.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
methylmalonate-semialdehyde dehydrogenase
SCNpilot_BF_INOC_scaffold_535_72
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78687..80045)
DNA (1359bp) protein (453aa)
Beta-alanine--pyruvate transaminase {ECO:0000313|EMBL:EZP56868.1}; EC=2.6.1.18 {ECO:0000313|EMBL:EZP56868.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
beta-alanine--pyruvate transaminase (EC:2.6.1.18)
Beta-alanine--pyruvate transaminase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I5_DELAS
SCNpilot_BF_INOC_scaffold_535_73
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80130..81119
DNA (990bp) protein (330aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBS1_ALIDK
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADV02060.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_BF_INOC_scaffold_535_74
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81373..83403)
DNA (2031bp) protein (677aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUT8_9BURK
two component transcriptional regulator, multi-sensor histidine kinase
SCNpilot_BF_INOC_scaffold_535_75
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83456..84286)
DNA (831bp) protein (277aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K01501 nitrilase [EC:3.5.5.1] Tax=CG_Rhodof_04
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUT7_9BURK
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase
SCNpilot_BF_INOC_scaffold_535_76
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84283..88353)
DNA (4071bp) protein (1357aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAA4_ACIAP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_535_77
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88473..91277
DNA (2805bp) protein (935aa)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y255_RAMTT
glutamate-ammonia-ligase adenylyltransferase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_535_78
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91366..91977
DNA (612bp) protein (204aa)
hypothetical protein id=5081418 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_535_79
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92028..92570)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036F9204
MOSC domain-containing protein Tax=CG_Rhodof_04
MOSC domain-containing protein
SCNpilot_BF_INOC_scaffold_535_80
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92567..93967)
DNA (1401bp) protein (467aa)
pepP; Xaa-Pro aminopeptidase PepP (EC:3.4.11.9) Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
aminopeptidase P (EC:3.4.11.9)
Peptidase m24 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG32_9BURK
SCNpilot_BF_INOC_scaffold_535_81
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93964..94740)
DNA (777bp) protein (259aa)
nucleotidyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036484A6
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:GAD23350.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
SCNpilot_BF_INOC_scaffold_535_82
unknown

Not on your lists

comp(94991..95296)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_535_83
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96093..96278
DNA (186bp) protein (62aa)
Addiction module antidote n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWH7_LEPCP
addiction module antidote Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
addiction module antidote
SCNpilot_BF_INOC_scaffold_535_84
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96314..96667
DNA (354bp) protein (118aa)
Death on curing protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WX80_DELAC
Death-on-curing protein {ECO:0000313|EMBL:KEH11246.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Putative death-on-curing protein Doc
SCNpilot_BF_INOC_scaffold_535_85
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96691..98334
DNA (1644bp) protein (548aa)
Carbohydrate kinase, FGGY n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W01_RHOFD
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
sugar (pentulose and hexulose) kinase
SCNpilot_BF_INOC_scaffold_535_86
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98435..99199
DNA (765bp) protein (255aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RU6_RHOFD
extracellular solute-binding protein
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ABD71507.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rh
SCNpilot_BF_INOC_scaffold_535_87
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99220..99987
DNA (768bp) protein (256aa)
Amino acid ABC transporter membrane protein, PAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12A00_POLSJ
amino acid ABC transporter permease
Amino acid ABC transporter membrane protein, PAAT family {ECO:0000313|EMBL:ABE44642.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas
SCNpilot_BF_INOC_scaffold_535_88
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99965..100696
DNA (732bp) protein (244aa)
ABC transporter-like protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RU4_RHOFD
ABC transporter-like protein
SCNpilot_BF_INOC_scaffold_535_89
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100897..102225
DNA (1329bp) protein (443aa)
hypothetical protein id=12552046 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
Displaying items 61-89 of 89 in total

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