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SCNpilot_BF_INOC_scaffold_535_65

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(71323..71943)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036B8928 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 203.0
  • Bit_score: 277
  • Evalue 1.10e-71
Response regulator {ECO:0000313|EMBL:EJL79739.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 203.0
  • Bit_score: 273
  • Evalue 2.30e-70
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 202.0
  • Bit_score: 272
  • Evalue 1.30e-70

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGTCCGCCACCGATGTCATGGTCTACATCGTCGACGACGATGCCGAAGTGCGCGAGGCGCTGGCCTGGCTGCTGCGCTCGCGCCGGCTGCCGTCGCAGGGCTTCGACAGCGCCCGCGCCTTCGAGCAGGCGCTGGATGCCGCGCCGCCCGAGTCGCCGGCCTGCATCCTGCTGGACGTGCGCATGCCCGGCACCAGCGGCCTGGCGCTGTTCGACCGGCTGCTGGAGCGCGGCATCGCCAGCGCCTGGCCGGTGATCTTCCTGACCGGCCACGCCAGCGTCGCCACCGCGGTGGAGGCGGTCAAGCGCGGCGCCTTCGACTTCTGCGAGAAGCCGTTTTCCGACAACGCGCTGGTCGACCGCATCGAGCGCGCGCTGGCGGTGTCGCGCCAGCGCGTGGCGCAACTGGGCGCGCAGCGCGCGCTGCGCGCCCGGCTGGACGAGCTGACCGAGCGCGAGCGCGAGGTCTTGCAGCGGGTGGCCAGCGGTCGCCCCAACAAGCTGATCGCCGACGAGCTGGGCATCAGCGTGCGCACGGTGGAGGTGCACCGCGCCCGGGTGTTCGAGAAGATGGACGTGAAATCGGCCGCCGAGCTGGCTCAATTGCTACAACAATTGTAG
PROTEIN sequence
Length: 207
MSATDVMVYIVDDDAEVREALAWLLRSRRLPSQGFDSARAFEQALDAAPPESPACILLDVRMPGTSGLALFDRLLERGIASAWPVIFLTGHASVATAVEAVKRGAFDFCEKPFSDNALVDRIERALAVSRQRVAQLGAQRALRARLDELTEREREVLQRVASGRPNKLIADELGISVRTVEVHRARVFEKMDVKSAAELAQLLQQL*