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SCNpilot_BF_INOC_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_581_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1020
DNA (1020bp) protein (340aa)
P-type conjugative transfer protein TrbL n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2BYY7_PSEAI
Conjugal transfer protein TrbL {ECO:0000313|EMBL:GAO21051.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
conjugal transfer protein TrbL
SCNpilot_BF_INOC_scaffold_581_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1039..1743
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2C3N2_PSEAI
Conjugal transfer protein TrbF {ECO:0000313|EMBL:GAO26452.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
conjugal transfer protein TrbF
SCNpilot_BF_INOC_scaffold_581_3
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1740..2756
DNA (1017bp) protein (339aa)
P-type conjugative transfer protein TrbG n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2BYZ8_PSEAI
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:KIN89055.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera s
p-type conjugative transfer protein trbg
SCNpilot_BF_INOC_scaffold_581_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2759..4336
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2BTZ5_PSEAI
Conjugative transfer protein TrbI {ECO:0000313|EMBL:GAO21054.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
conjugation TrbI family protein
SCNpilot_BF_INOC_scaffold_581_5
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5014..5583
DNA (570bp) protein (190aa)
Transcription elongation factor GreB n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KP20_9BURK
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteoba
transcription elongation factor GreB
SCNpilot_BF_INOC_scaffold_581_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5700..7940)
DNA (2241bp) protein (747aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ABM34136.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ABM34136.1};; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TT48_ACIAC
SCNpilot_BF_INOC_scaffold_581_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8037..8237)
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=4 Tax=Comamonas testosteroni RepID=D0J5N5_COMT2
DNA-directed RNA polymerase subunit omega
SCNpilot_BF_INOC_scaffold_581_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8261..8881)
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYP2_RAMTT
gmk; guanylate kinase
SCNpilot_BF_INOC_scaffold_581_9
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9180..9821)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C183_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21738.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_581_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9867..10925)
DNA (1059bp) protein (353aa)
Luciferase family protein id=1287763 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
luciferase-like
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_581_11
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11232..11651
DNA (420bp) protein (140aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhiz
alkylhydroperoxidase n=1 Tax=Rhizobium giardinii RepID=UPI000360CA18
alkylhydroperoxidase AhpD family core domain protein
SCNpilot_BF_INOC_scaffold_581_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11791..14352
DNA (2562bp) protein (854aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122X8_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46414.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_581_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14479..15144
DNA (666bp) protein (222aa)
carboxylesterase (EC:3.1.1.1)
Putative esterase n=1 Tax=Polaromonas sp. CF318 RepID=J2KW55_9BURK
Putative esterase {ECO:0000313|EMBL:EJL77243.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
SCNpilot_BF_INOC_scaffold_581_14
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15454..16641)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037542FF
membrane dipeptidase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_581_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16647..17744)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003604BA3
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17847.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
SCNpilot_BF_INOC_scaffold_581_16
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17862..18737)
DNA (876bp) protein (292aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CRW3_9BURK
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EJL77264.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polar
peptidase m23
SCNpilot_BF_INOC_scaffold_581_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18893..19405
DNA (513bp) protein (171aa)
Hemerythrin-like metal-binding protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVQ5_COMTE
hemerythrin
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:EED67677.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
SCNpilot_BF_INOC_scaffold_581_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19434..20072)
DNA (639bp) protein (213aa)
GntR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTS1_9BURK
transcriptional regulator, GntR family Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_581_19
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20218..22461
DNA (2244bp) protein (748aa)
Candidate methylmalonyl-CoA mutase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWF9_RAMTT
Candidate methylmalonyl-CoA mutase {ECO:0000313|EMBL:AEG92913.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacte
methylmalonyl-CoA mutase
SCNpilot_BF_INOC_scaffold_581_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22462..23484
DNA (1023bp) protein (341aa)
transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EEF72
Arginine/ornithine transport system ATPase {ECO:0000313|EMBL:GAD22093.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
arginine/ornithine transport system ATPase
SCNpilot_BF_INOC_scaffold_581_21
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23490..24317
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D4X8_LARHH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO75919.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongen
SCNpilot_BF_INOC_scaffold_581_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24348..25880
DNA (1533bp) protein (511aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Brachymonas chironomi RepID=UPI00037B57E8
carboxyl transferase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_581_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26121..28181
DNA (2061bp) protein (687aa)
acetyl-CoA carboxylase n=1 Tax=Brachymonas chironomi RepID=UPI000362DCF4
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EIK92607.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=
acetyl-CoA carboxylase
SCNpilot_BF_INOC_scaffold_581_24
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28200..28499
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00036BFDA3
UPF0235 protein QR66_06625 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobac
hypothetical protein
SCNpilot_BF_INOC_scaffold_581_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28576..29583
DNA (1008bp) protein (336aa)
beta-lactamase n=1 Tax=Acidovorax radicis RepID=UPI00023758CB
Putative beta-lactamase {ECO:0000313|EMBL:AGU51974.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
putative beta-lactamase
SCNpilot_BF_INOC_scaffold_581_26
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29588..30205
DNA (618bp) protein (206aa)
Nicotinamidase (EC:3.5.1.19)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI000369E4DD
Nicotinamidase {ECO:0000313|EMBL:KDP86041.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
SCNpilot_BF_INOC_scaffold_581_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30282..30755
DNA (474bp) protein (158aa)
UPI0003CFD9E0 related cluster n=1 Tax=unknown RepID=UPI0003CFD9E0
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36286.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
lactoylglutathione lyase
SCNpilot_BF_INOC_scaffold_581_28
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30925..32757
DNA (1833bp) protein (611aa)
glutamate synthase (nadph) (EC:1.4.1.13)
Glutamate synthase (NADPH) n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZE2_VARPE
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_581_29
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32754..34523
DNA (1770bp) protein (590aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZE3_VARPE
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_581_30
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34520..35575
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] id=12551293 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-oxoglutarate synthase (EC:1.2.7.3)
Displaying items 1-30 of 87 in total

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