ggKbase home page

SCNpilot_BF_INOC_scaffold_585

Search features with annotation key words

Displaying items 121-150 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_585_121
unknown

Not on your lists

107663..107878
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_585_122
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107880..108665
DNA (786bp) protein (262aa)
mntA1; putative manganese transport system ATP-asa protein (EC:3.6.3.35); K02074 zinc/manganese transport system ATP-binding protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
Putative manganese transport system, ATP-asa protein id=1262461 bin=GWE1_Burkholderiales_65_30 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ABC-type Mn/Zn transport systems, ATPase component
SCNpilot_BF_INOC_scaffold_585_123
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108662..109558
DNA (897bp) protein (299aa)
ABC transporter; K02075 zinc/manganese transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC superfamily ATP binding cassette transporter, membrane protein id=1262460 bin=GWE1_Burkholderiales_65_30 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ABC-type Mn2+/Zn2+ transport system, permease components
SCNpilot_BF_INOC_scaffold_585_124
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109680..110564
DNA (885bp) protein (295aa)
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Periplasmic solute binding protein id=1262459 bin=GWE1_Burkholderiales_65_30 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ABC-type metal ion transport system, periplasmic component/surface adhesin
SCNpilot_BF_INOC_scaffold_585_125
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110691..113477
DNA (2787bp) protein (929aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:ABM40402.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ABM40402.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2C7_ACISJ
SCNpilot_BF_INOC_scaffold_585_126
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113494..114297)
DNA (804bp) protein (268aa)
3',5'-cyclic-nucleotide phosphodiesterase (Cyclic AMP phosphodiesterase)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y283_RAMTT
3',5'-cyclic-nucleotide phosphodiesterase
3',5'-cyclic-nucleotide phosphodiesterase (Cyclic AMP phosphodiesterase)-like protein {ECO:0000313|EMBL:AEG94851.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
SCNpilot_BF_INOC_scaffold_585_127
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114315..116552)
DNA (2238bp) protein (746aa)
adenylate/guanylate cyclase with chase sensor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Putative transmembrane sensor domain protein id=1283739 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
adenylate/guanylate cyclase with chase sensor
SCNpilot_BF_INOC_scaffold_585_128
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116720..117376)
DNA (657bp) protein (219aa)
FHA-domain-containing proteins-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y284_RAMTT
FHA-domain-containing proteins
FHA-domain-containing proteins-like protein {ECO:0000313|EMBL:AEG94852.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="R
SCNpilot_BF_INOC_scaffold_585_129
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117462..118217)
DNA (756bp) protein (252aa)
serine/threonine specific protein phosphatase (EC:3.1.3.16)
Serine/threonine specific protein phosphatase (Putative) {ECO:0000313|EMBL:ABM93030.1}; EC=3.1.3.16 {ECO:0000313|EMBL:ABM93030.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria;
Serine/threonine specific protein phosphatase (Putative) n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBU1_METPP
SCNpilot_BF_INOC_scaffold_585_130
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118279..118911)
DNA (633bp) protein (211aa)
Integral membrane protein TerC n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RG1_RHOFD
integral membrane protein TerC Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
integral membrane protein TerC
SCNpilot_BF_INOC_scaffold_585_131
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119019..119912)
DNA (894bp) protein (298aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
succinyl-CoA synthetase subsunit alpha n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037848F7
succinyl-CoA synthetase subunit alpha
SCNpilot_BF_INOC_scaffold_585_132
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119926..121089)
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y289_RAMTT
sucC; succinyl-CoA synthetase subunit beta rbh
SCNpilot_BF_INOC_scaffold_585_133
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121285..122199
DNA (915bp) protein (305aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0111
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F196C
SCNpilot_BF_INOC_scaffold_585_134
unknown

Not on your lists

comp(122466..123023)
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_585_135
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123238..123711)
DNA (474bp) protein (158aa)
recX; RecX family regulatory protein; K03565 regulatory protein id=12550723 bin=BDI species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
SCNpilot_BF_INOC_scaffold_585_136
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(123904..124953)
DNA (1050bp) protein (350aa)
Protein RecA n=1 Tax=Variovorax paradoxus B4 RepID=T1XJZ3_VARPD
reca protein
recombination protein RecA Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_BF_INOC_scaffold_585_137
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125096..125569
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000370C793
MarR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
MarR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_585_138
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125701..126375
DNA (675bp) protein (225aa)
Transcriptional regulatory protein tctD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD07_9BURK
response regulator receiver
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_585_139
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126433..127881
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acid
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002D80E5E
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_585_140
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127985..129397)
DNA (1413bp) protein (471aa)
mnmE; tRNA modification GTPase MnmE (EC:3.6.-.-)
tRNA modification GTPase TrmE n=1 Tax=Variovorax paradoxus RepID=UPI00037B2593
trmE; tRNA modification GTPase TrmE Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_BF_INOC_scaffold_585_141
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129437..130696
DNA (1260bp) protein (420aa)
Amidohydrolase family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4W7_VARPD
amidohydrolase family protein
Amidohydrolase family protein {ECO:0000313|EMBL:AGU47205.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
SCNpilot_BF_INOC_scaffold_585_142
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130854..132440)
DNA (1587bp) protein (529aa)
Extracellular solute-binding protein family 5 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QCS2_ACIAP
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADX48661.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
SCNpilot_BF_INOC_scaffold_585_143
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132675..134369)
DNA (1695bp) protein (565aa)
Membrane protein insertase YidC n=2 Tax=Alicycliphilus denitrificans RepID=E8TZI7_ALIDB
membrane protein insertase, YidC/Oxa1 family domain-containing
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
SCNpilot_BF_INOC_scaffold_585_144
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134366..134650)
DNA (285bp) protein (95aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Delftia acidovorans RepID=S2X554_DELAC
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
hypothetical protein
SCNpilot_BF_INOC_scaffold_585_145
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134650..135099)
DNA (450bp) protein (150aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TWI8_ACIAC
hypothetical protein
SCNpilot_BF_INOC_scaffold_585_146
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(135121..135255)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=12 Tax=Comamonadaceae RepID=RL34_ACIAC
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycl
SCNpilot_BF_INOC_scaffold_585_147
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135626..137119
DNA (1494bp) protein (498aa)
chromosomal replication initiation protein n=1 Tax=Acidovorax radicis RepID=UPI0002377140
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
SCNpilot_BF_INOC_scaffold_585_148
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137116..138246
DNA (1131bp) protein (377aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=573060 species="Bacter
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7V2_ACIDE
SCNpilot_BF_INOC_scaffold_585_149
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138331..140928
DNA (2598bp) protein (866aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=397945 species="Bacteria; Pr
DNA gyrase subunit B n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TI33_ACIAC
SCNpilot_BF_INOC_scaffold_585_150
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141066..142439
DNA (1374bp) protein (458aa)
Cell wall/surface repeat protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZD9_DELSC
cell wall/surface repeat protein
Cell wall/surface repeat protein {ECO:0000313|EMBL:AEF89454.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
Displaying items 121-150 of 196 in total

View Taxonomy