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SCNpilot_BF_INOC_scaffold_585

Search features with annotation key words

Displaying items 151-180 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_585_151
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142488..143399)
DNA (912bp) protein (304aa)
DNA polymerase-like protein (EC:2.7.7.7); K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=5082946 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DNA polymerase-like protein (EC:2.7.7.7); K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=GWE1_Burkholderiales_65_30_curated
DNA polymerase-like protein (EC:2.7.7.7)
SCNpilot_BF_INOC_scaffold_585_152
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143425..143946)
DNA (522bp) protein (174aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA75_9BURK
Alanine acetyltransferase {ECO:0000313|EMBL:KJA10138.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.
ribosomal-protein-alanine acetyltransferase
SCNpilot_BF_INOC_scaffold_585_153
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143946..144659)
DNA (714bp) protein (238aa)
Peptidase M22 glycoprotease n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UXG6_VARPE
peptidase m22 glycoprotease
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ADU39956.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
SCNpilot_BF_INOC_scaffold_585_154
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144656..144859)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222V5_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD67948.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
SCNpilot_BF_INOC_scaffold_585_155
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144882..145610)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002FE3D7D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48202.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_585_156
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145619..146599)
DNA (981bp) protein (327aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BUG1_DELAS
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ10855.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_585_157
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146692..147666
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYM6_DELSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP45761.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_BF_INOC_scaffold_585_158
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147677..148942
DNA (1266bp) protein (422aa)
L-carnitine dehydratase/bile acid-inducible protein F n=2 Tax=Alicycliphilus denitrificans RepID=E8TX75_ALIDB
l-carnitine dehydratase/bile acid-inducible protein f
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADU98343.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus
SCNpilot_BF_INOC_scaffold_585_159
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148977..150353
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036E1C6D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYS96963.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
SCNpilot_BF_INOC_scaffold_585_160
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150362..151924
DNA (1563bp) protein (521aa)
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00037D2DC3
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_585_161
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152022..153110)
DNA (1089bp) protein (363aa)
tartrate dehydrogenase (EC:1.1.1.93)
Tartrate dehydrogenase {ECO:0000313|EMBL:ACB35254.1}; EC=1.1.1.93 {ECO:0000313|EMBL:ACB35254.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" sou
Tartrate dehydrogenase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZ84_LEPCP
SCNpilot_BF_INOC_scaffold_585_162
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153197..154105)
DNA (909bp) protein (303aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12550790 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
lipase
SCNpilot_BF_INOC_scaffold_585_163
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154157..155149)
DNA (993bp) protein (331aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHK4_ACIET
translation factor SUA5
SCNpilot_BF_INOC_scaffold_585_164
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155149..156348)
DNA (1200bp) protein (400aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Acidovorax avenae RepID=UPI00031B1C71
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
SCNpilot_BF_INOC_scaffold_585_165
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156511..156984)
DNA (474bp) protein (158aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Curvibacter lanceolatus RepID=UPI000376B788
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
SCNpilot_BF_INOC_scaffold_585_166
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157066..158022
DNA (957bp) protein (319aa)
thioredoxin n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958175
Thioredoxin {ECO:0000313|EMBL:KJA10147.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
thioredoxin
SCNpilot_BF_INOC_scaffold_585_167
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(158129..158938)
DNA (810bp) protein (270aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Alicycliphilus denitrificans RepID=E8TYR6_ALIDB
dimethyladenosine transferase
SCNpilot_BF_INOC_scaffold_585_168
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159182..160687)
DNA (1506bp) protein (502aa)
Chaperone SurA n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSE0_9BURK
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
survival protein surA
SCNpilot_BF_INOC_scaffold_585_169
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160680..163067)
DNA (2388bp) protein (796aa)
LPS-assembly protein LptD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7X8_ACIDE
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
organic solvent tolerance protein
SCNpilot_BF_INOC_scaffold_585_170
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163139..164251
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG42_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88182.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
aminoglycoside phosphotransferase
SCNpilot_BF_INOC_scaffold_585_171
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164434..167055)
DNA (2622bp) protein (874aa)
ATP-dependent transcriptional regulator-like protein protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDT6_METPP
ATP-dependent transcriptional regulator-like protein protein {ECO:0000313|EMBL:ABM93725.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="
ATP-dependent transcriptional regulator-like protein
SCNpilot_BF_INOC_scaffold_585_172
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167192..167728)
DNA (537bp) protein (179aa)
Putative lipoprotein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEG9_ANADF
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABS27115.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
SCNpilot_BF_INOC_scaffold_585_173
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167922..168590
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDT5_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS54405.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_585_174
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168723..170009
DNA (1287bp) protein (429aa)
Uracil-xanthine permease n=1 Tax=Variovorax sp. CF313 RepID=J2JSU6_9BURK
Uracil-xanthine permease {ECO:0000313|EMBL:EJL70915.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313
uracil-xanthine permease
SCNpilot_BF_INOC_scaffold_585_175
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170053..170844
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLS4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU43873.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_585_176
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170855..171436)
DNA (582bp) protein (194aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:ADU97863.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ADU97863.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
ATP/cobalamin adenosyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRF2_ALIDB
SCNpilot_BF_INOC_scaffold_585_177
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171447..171896)
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|H
3-dehydroquinate dehydratase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=AROQ_LEPCP
SCNpilot_BF_INOC_scaffold_585_178
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171911..172750)
DNA (840bp) protein (280aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBH1_9BURK
SCNpilot_BF_INOC_scaffold_585_179
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172817..173251
DNA (435bp) protein (145aa)
phenylacetic acid degradation-like protein id=5081600 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phenylacetic acid degradation-like protein Tax=GWE1_Burkholderiales_65_30_curated
phenylacetic acid degradation-like protein
SCNpilot_BF_INOC_scaffold_585_180
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173372..174799
DNA (1428bp) protein (476aa)
D-lactate dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036A8FAE
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABM30708.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax c
Displaying items 151-180 of 196 in total

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