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SCNpilot_BF_INOC_scaffold_601

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_601_1
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29..790)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2GCZ7_BURVI
Uncharacterised protein {ECO:0000313|EMBL:CRE28024.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_BF_INOC_scaffold_601_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1199..2092
DNA (894bp) protein (298aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7) Tax=GWA2_Curvibacter_64_110_curated
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000360B998
SCNpilot_BF_INOC_scaffold_601_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2193..2528
DNA (336bp) protein (112aa)
hypothetical protein; K09747 hypothetical protein id=12552274 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2633..3223
DNA (591bp) protein (197aa)
recombinase RecR n=1 Tax=Acidovorax avenae RepID=UPI00030C53A7
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
SCNpilot_BF_INOC_scaffold_601_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3238..3984
DNA (747bp) protein (249aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=596153 specie
NAD-dependent protein deacylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRQ1_ALIDB
silent information regulator protein sir2
SCNpilot_BF_INOC_scaffold_601_6
unknown

Not on your lists

comp(4141..4809)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_601_7
unknown

Not on your lists

4868..5554
DNA (687bp) protein (229aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_601_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5376..5978)
DNA (603bp) protein (201aa)
chromate transporter; K07240 chromate transporter id=5083705 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
chromate transporter Tax=GWE1_Burkholderiales_65_30_curated
chromate transporter
SCNpilot_BF_INOC_scaffold_601_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5975..6559)
DNA (585bp) protein (195aa)
chromate transporter; K07240 chromate transporter id=5083706 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
chrA; chromate transport protein, half length
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_601_10
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6568..6921)
DNA (354bp) protein (118aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Th
Arsenate reductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z733_9RHOO
arsenate reductase
SCNpilot_BF_INOC_scaffold_601_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..8442)
DNA (1203bp) protein (401aa)
hypothetical protein id=5081145 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8455..9009)
DNA (555bp) protein (185aa)
hypothetical protein id=5081144 bin=GWF1_Burkholderiales_GWF1_66_17 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9031..9483)
DNA (453bp) protein (151aa)
Thioesterase superfamily protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPD0_9BURK
Thioesterase superfamily protein {ECO:0000313|EMBL:EIK91070.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogeno
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_14
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9610..10245
DNA (636bp) protein (212aa)
CHRD domain containing protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNH8_POLNA
CHRD domain-containing protein
CHRD domain containing protein {ECO:0000313|EMBL:ABM37206.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" sou
SCNpilot_BF_INOC_scaffold_601_15
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10327..10863
DNA (537bp) protein (179aa)
CHRD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WA4_RHOFD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10981..13269
DNA (2289bp) protein (763aa)
radical SAM protein n=1 Tax=Brachymonas chironomi RepID=UPI00037C07F9
UPF0313 protein Q5W_4727 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13525..15207
DNA (1683bp) protein (561aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=987059 spe
fhs; formate-tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM33_9BURK
SCNpilot_BF_INOC_scaffold_601_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15328..15894)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A0C340
Uncharacterized protein {ECO:0000313|EMBL:CDX25581.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_601_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16085..18070)
DNA (1986bp) protein (662aa)
Small GTP-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6Z2_ALIDK
small GTP-binding protein
Small GTP-binding protein {ECO:0000313|EMBL:AEB83158.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
SCNpilot_BF_INOC_scaffold_601_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18178..18792
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E34BED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD35329.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_BF_INOC_scaffold_601_21
unknown

Not on your lists

comp(18915..19148)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_601_22
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19210..20682)
DNA (1473bp) protein (491aa)
exoribonuclease II (EC:3.1.13.1)
exoribonuclease II (EC:3.1.13.1); K01147 exoribonuclease II [EC:3.1.13.1] Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Exoribonuclease II n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YJ8_RHOFD
SCNpilot_BF_INOC_scaffold_601_23
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20717..21418)
DNA (702bp) protein (234aa)
Putative membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ENK6_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJE53836.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF31
colD-shock DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_601_24

Not on your lists

comp(21453..22907)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=C6KUM5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:BAH89673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
WS/DGAT/MGAT acyltransferase
SCNpilot_BF_INOC_scaffold_601_25
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22948..23238)
DNA (291bp) protein (97aa)
Polyhydroxyalkanoic acid system protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIN1_ACCPU
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:KFB75329.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Acc
polyhydroxyalkanoic acid system protein
SCNpilot_BF_INOC_scaffold_601_26
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23322..24038
DNA (717bp) protein (239aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.6); K01031 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
3-oxoacid CoA-transferase subunit A (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit A n=1 Tax=Curvibacter lanceolatus RepID=UPI000363B523
SCNpilot_BF_INOC_scaffold_601_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24054..24422
DNA (369bp) protein (123aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EIK89816.1}; EC=2.8.3.8 {ECO:0000313|EMBL:EIK89816.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
3-oxoacid CoA-transferase, B subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKS6_9BURK
3-oxoacid CoA-transferase subunit B
SCNpilot_BF_INOC_scaffold_601_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24386..24628
DNA (243bp) protein (81aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EIK89816.1}; EC=2.8.3.8 {ECO:0000313|EMBL:EIK89816.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
3-oxoacid CoA-transferase, B subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKS6_9BURK
3-oxoadipate CoA-transferase subunit B
SCNpilot_BF_INOC_scaffold_601_29
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24721..25107)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TFZ9_9BURK
Uncharacterised protein {ECO:0000313|EMBL:CRE30869.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_BF_INOC_scaffold_601_30
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25192..25629)
DNA (438bp) protein (146aa)
UPI0003D6CB6F related cluster n=1 Tax=unknown RepID=UPI0003D6CB6F
hypothetical protein
UPI0003D6CB6F related cluster Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
Displaying items 1-30 of 60 in total

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