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SCNpilot_BF_INOC_scaffold_635

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_635_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..3048)
DNA (3048bp) protein (1016aa)
DNA polymerase III, alpha subunit n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KPE7_9BURK
DNA polymerase III subunit alpha
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_635_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3140..3586)
DNA (447bp) protein (149aa)
DoxX family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYA5_VARPE
Variovorax paradoxus strain MEDvA23 contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ30518.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
doxx family protein
SCNpilot_BF_INOC_scaffold_635_3
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3725..4426)
DNA (702bp) protein (234aa)
Pirin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRU5_ALIDB
pirin domain-containing protein; K06911 Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
pirin
SCNpilot_BF_INOC_scaffold_635_4
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4534..5469
DNA (936bp) protein (312aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0K320_9BURK
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_635_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5479..6546
DNA (1068bp) protein (356aa)
FAD dependent oxidoreductase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRL0_ACIAC
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABM33598.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrul
SCNpilot_BF_INOC_scaffold_635_6
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6669..7634
DNA (966bp) protein (322aa)
glutamate--tRNA ligase (EC:6.1.1.17); K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9X4_9BURK
glutamate--tRNA ligase
SCNpilot_BF_INOC_scaffold_635_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7801..8586)
DNA (786bp) protein (262aa)
UBA/THIF-type NAD/FAD binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUY6_ALIDB
uba/thif-type nad/fad binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:GAO22697.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_BF_INOC_scaffold_635_8
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8583..9701)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000371856A
hypothetical protein; K07112 Tax=GWA2_Curvibacter_64_110_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_635_9
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9957..12806
DNA (2850bp) protein (950aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNN8_ACIAC
valyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_635_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12847..13899)
DNA (1053bp) protein (351aa)
D-3-phosphoglycerate dehydrogenase (Phosphoglycerate dehydrogenase)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXC1_RAMTT
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase (Phosphoglycerate dehydrogenase)-like protein {ECO:0000313|EMBL:AEG94256.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
SCNpilot_BF_INOC_scaffold_635_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13916..14803
DNA (888bp) protein (296aa)
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023782AE
SCNpilot_BF_INOC_scaffold_635_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14810..16198)
DNA (1389bp) protein (463aa)
Putative transporter-like membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK07_9BURK
Putative transporter-like membrane protein {ECO:0000313|EMBL:EIK89547.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=
multidrug transporter MATE
SCNpilot_BF_INOC_scaffold_635_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16257..16751)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZVR6_9NEIS
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_635_14
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16742..17362)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK24141.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. F
hypothetical protein
Uncharacterized protein id=1270028 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_635_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..17731)
DNA (228bp) protein (76aa)
sira family protein id=12551028 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
sira family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
sira family protein
SCNpilot_BF_INOC_scaffold_635_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17746..18294)
DNA (549bp) protein (183aa)
ADP-ribose pyrophosphatase n=1 Tax=Variovorax paradoxus RepID=UPI0003719E09
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADU35614.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain E
SCNpilot_BF_INOC_scaffold_635_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18365..19267)
DNA (903bp) protein (301aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Al
Cysteine synthase B n=2 Tax=Alicycliphilus denitrificans RepID=E8TV23_ALIDB
cysteine synthase B
SCNpilot_BF_INOC_scaffold_635_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19457..20722)
DNA (1266bp) protein (422aa)
Acyl-CoA dehydrogenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUM5_9BURK
acyl-CoA dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
acyl-CoA dehydrogenase-like protein
SCNpilot_BF_INOC_scaffold_635_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21063..22034)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381BE6C
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD21583.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
hypothetical protein
SCNpilot_BF_INOC_scaffold_635_20
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22140..23060)
DNA (921bp) protein (307aa)
NAD(P)-bidning domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X7M1_VARPD
nucleoside-diphosphate-sugar epimerase-like protein Tax=GWA2_Curvibacter_64_110_curated
NAD(P)-bidning domain-containing protein
SCNpilot_BF_INOC_scaffold_635_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23110..24153
DNA (1044bp) protein (348aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Variovorax paradoxus RepID=UPI00037580B6
CDP-6-deoxy-delta-3,4-glucoseen reductase
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACS17944.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
SCNpilot_BF_INOC_scaffold_635_22
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24243..25208
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE7_ALIDB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYC50759.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hy
hypothetical protein
SCNpilot_BF_INOC_scaffold_635_23
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25273..25989)
DNA (717bp) protein (239aa)
Candidate ABC type branched chain amino acid transport systems, ATP-binding component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXD4_RAMTT
branched chain amino acid ABC transporter ATP-binding protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_635_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25991..26764)
DNA (774bp) protein (258aa)
ABC transporter n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00037CC431
ABC transporter
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABM43484.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_BF_INOC_scaffold_635_25
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26786..27973)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00037B035A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJA11831.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
inner-membrane translocator
SCNpilot_BF_INOC_scaffold_635_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27993..28922)
DNA (930bp) protein (310aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=2 Tax=Acidovorax RepID=A1WB61_ACISJ
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACM34147.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
SCNpilot_BF_INOC_scaffold_635_27
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29153..29692)
DNA (540bp) protein (180aa)
ATPase AAA n=1 Tax=Acidovorax radicis RepID=UPI00023758B5
recombination factor protein RarA Tax=GWA2_Burkholderiales_64_37_curated
aaa ATPase central domain-containing protein
SCNpilot_BF_INOC_scaffold_635_28
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30742..31053
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000377C8F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26386.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_BF_INOC_scaffold_635_29
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30986..31327)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3D4_ACIAP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
Displaying 29 items

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