ggKbase home page

SCNpilot_BF_INOC_scaffold_757

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_757_1
unknown

Not on your lists

comp(158..454)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_757_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(608..1108)
DNA (501bp) protein (167aa)
Pilin n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQA0_DELAS
pilin
Pilin {ECO:0000313|EMBL:ABX33510.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH
SCNpilot_BF_INOC_scaffold_757_3
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1700..2002)
DNA (303bp) protein (101aa)
DNA-binding protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WYN5_PSEDE
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:KHA63052.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. An
SCNpilot_BF_INOC_scaffold_757_4
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2083..2583
DNA (501bp) protein (167aa)
Sel1-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z03_RHOFD
Uncharacterized protein {ECO:0000313|EMBL:CDS48030.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_
Sel1-like protein
SCNpilot_BF_INOC_scaffold_757_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2785..4185)
DNA (1401bp) protein (467aa)
general secretory pathway protein E id=12553343 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretory pathway protein E
general secretory pathway protein E Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_BF_INOC_scaffold_757_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4194..6527)
DNA (2334bp) protein (778aa)
Type II and III secretion system protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DW3_POLSJ
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:ABE43279.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Pola
SCNpilot_BF_INOC_scaffold_757_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6593..7417)
DNA (825bp) protein (275aa)
general secretion pathway protein N n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C9918
Putative general secretory pathway N transmembrane protein {ECO:0000313|EMBL:GAD20665.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovor
general secretory pathway protein N
SCNpilot_BF_INOC_scaffold_757_8
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7414..7926)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DW5_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43277.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_757_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7923..8906)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DW6_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43276.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
SCNpilot_BF_INOC_scaffold_757_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9117..10142)
DNA (1026bp) protein (342aa)
Type II secretion system protein K n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DW7_POLSJ
general secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.
SCNpilot_BF_INOC_scaffold_757_11
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10139..10927)
DNA (789bp) protein (263aa)
Methylation n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221L5_RHOFD
methylation; K02459 general secretion pathway protein J Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
methylation
SCNpilot_BF_INOC_scaffold_757_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10927..11283)
DNA (357bp) protein (119aa)
Candidate pseudopilin, general secretion pathway protein I (PilD-dependent protein), component of type II secretion system n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0Q4_RAMTT
general secretion pathway protein I
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_757_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11280..11675)
DNA (396bp) protein (132aa)
general secretion pathway protein H; K02457 general secretion pathway protein H id=12550618 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretion pathway protein H; K02457 general secretion pathway protein H Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
general secretion pathway protein h
SCNpilot_BF_INOC_scaffold_757_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11890..12333)
DNA (444bp) protein (148aa)
General secretion pathway protein G n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDA2_ACIET
general secretion pathway protein g
General secretion pathway protein G {ECO:0000313|EMBL:ACM32134.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_BF_INOC_scaffold_757_15
unknown

Not on your lists

12364..12702
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_757_16
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12689..13006
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Treponema denticola H-22 RepID=M2BBS3_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB21550.1}; TaxID=999434 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola OTK.;"
coenzyme A disulfide reductase
SCNpilot_BF_INOC_scaffold_757_17
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13070..14638)
DNA (1569bp) protein (523aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1045855 species="Bacteria; Proteobacte
Threonine dehydratase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUX2_PSEUP
threonine dehydratase
SCNpilot_BF_INOC_scaffold_757_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14985..15434
DNA (450bp) protein (150aa)
osmotically inducible protein C n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C06D7
OsmC family protein {ECO:0000313|EMBL:GAD20677.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_757_19
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15526..16161)
DNA (636bp) protein (212aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hyd
coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Coq7 (EC:1.14.13.-)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KP67_9BURK
SCNpilot_BF_INOC_scaffold_757_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16426..17352
DNA (927bp) protein (309aa)
porin id=12551222 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
porin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
porin
SCNpilot_BF_INOC_scaffold_757_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18133..18612
DNA (480bp) protein (160aa)
Porin n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZU6_9BURK
Porin {ECO:0000313|EMBL:EHL22093.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_BF_INOC_scaffold_757_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18954..19934
DNA (981bp) protein (327aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPL9_VARPS
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS17740.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_BF_INOC_scaffold_757_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20025..20936
DNA (912bp) protein (304aa)
ABC transporter permease n=1 Tax=Comamonas sp. B-9 RepID=UPI000395E150
ABC transporter permease
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU98576.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
SCNpilot_BF_INOC_scaffold_757_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21009..21983
DNA (975bp) protein (325aa)
peptide ABC transporter ATPase (EC:3.6.3.24)
UPI0003A9A57C related cluster n=1 Tax=unknown RepID=UPI0003A9A57C
Peptide ABC transporter ATPase {ECO:0000313|EMBL:GAD20685.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_BF_INOC_scaffold_757_25
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21980..23092
DNA (1113bp) protein (371aa)
Candidate ABC type dipeptide/oligopeptide transport system, ATP-binding component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0N9_RAMTT
ABC-type oligopeptide transport system, ATPase component
ABC-type oligopeptide transport system, ATPase component {ECO:0000313|EMBL:BAO84494.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="
SCNpilot_BF_INOC_scaffold_757_26
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23241..23897
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4HEI0_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI20454.1}; TaxID=1160283 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_757_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23965..24912
DNA (948bp) protein (316aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=512030 species="Bacteria; Proteobact
transaldolase B (EC:2.2.1.2)
Transaldolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZV6_9BURK
SCNpilot_BF_INOC_scaffold_757_28
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25095..26699
DNA (1605bp) protein (535aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FI3_POLSJ
SCNpilot_BF_INOC_scaffold_757_29
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26992..28641)
DNA (1650bp) protein (550aa)
60 kDa chaperonin n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=CH60_LEPCP
groEL; chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=395495 species="Bacteria; Proteobacteria; B
SCNpilot_BF_INOC_scaffold_757_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28766..29059)
DNA (294bp) protein (98aa)
10 kDa chaperonin n=2 Tax=Alicycliphilus denitrificans RepID=E8TZN7_ALIDB
chaperonin cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=596154 speci
Displaying items 1-30 of 76 in total

View Taxonomy