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SCNpilot_BF_INOC_scaffold_797

Search features with annotation key words

Displaying items 61-90 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_797_61
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59099..60520)
DNA (1422bp) protein (474aa)
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
sensor histidine kinase TctE (EC:2.7.3.-); K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] id=5080155 bin=GWF1_Burkholderiales_GWF1_66_17 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_797_62
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60517..61185)
DNA (669bp) protein (223aa)
winged helix family two component transcriptional regulator Tax=CG_Rhodof_03
Winged helix family two component transcriptional regulator id=1262716 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
winged helix family two component transcriptional regulator
SCNpilot_BF_INOC_scaffold_797_63
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61207..62751)
DNA (1545bp) protein (515aa)
carbohydrate kinase id=12551519 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
carbohydrate kinase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_797_64
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63002..67162
DNA (4161bp) protein (1387aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QCC8_ACIAP
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_797_65
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67286..70360
DNA (3075bp) protein (1025aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI000366808E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92625.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_797_66
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70406..70882
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI0003785604
Protein-S-isoprenylcysteine methyltransferase {ECO:0000313|EMBL:KJJ95864.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou
hypothetical protein
SCNpilot_BF_INOC_scaffold_797_67
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70922..71875)
DNA (954bp) protein (318aa)
Alpha/beta hydrolase fold-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XI12_VARPD
alpha/beta hydrolase fold-containing protein
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:AGU52178.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
SCNpilot_BF_INOC_scaffold_797_68
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72030..73193)
DNA (1164bp) protein (388aa)
L-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
L-lactate dehydrogenase (cytochrome) id=12549862 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase
SCNpilot_BF_INOC_scaffold_797_69
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73268..73834
DNA (567bp) protein (189aa)
DedA n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128H8_POLSJ
hypothetical protein
DedA {ECO:0000313|EMBL:ABE45064.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA
SCNpilot_BF_INOC_scaffold_797_70
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73977..75317
DNA (1341bp) protein (447aa)
multidrug transporter MatE n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A2DB
MATE efflux family protein Tax=GWA2_Burkholderiales_64_37_curated
MATE efflux family protein
SCNpilot_BF_INOC_scaffold_797_71
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75318..76061)
DNA (744bp) protein (248aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
glutathione reductase (EC:1.8.1.7)
glutathione reductase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395872A
SCNpilot_BF_INOC_scaffold_797_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76779..77258)
DNA (480bp) protein (160aa)
asnC family transcriptional regulator id=12549674 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
asnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
asnC family transcriptional regulator
SCNpilot_BF_INOC_scaffold_797_73
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77391..78659
DNA (1269bp) protein (423aa)
methionine gamma-lyase (EC:4.4.1.11) id=12549675 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methionine gamma-lyase (EC:4.4.1.11) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methionine gamma-lyase (EC:4.4.1.11)
SCNpilot_BF_INOC_scaffold_797_74
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78752..81412
DNA (2661bp) protein (887aa)
2-oxo-acid dehydrogenase E1 subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB85_ALIDK
2-oxoacid dehydrogenase subunit E1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_BF_INOC_scaffold_797_75
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81455..82432)
DNA (978bp) protein (326aa)
Uncharacterized protein UPF0065 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNK6_VEREI
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM59213.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter
SCNpilot_BF_INOC_scaffold_797_76
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82467..83207)
DNA (741bp) protein (247aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNK7_VEREI
enoyl-CoA hydratase/isomerase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABM59214.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Vermineph
SCNpilot_BF_INOC_scaffold_797_77
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83246..85381)
DNA (2136bp) protein (712aa)
CoA-binding domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNK8_VEREI
CoA-binding domain protein {ECO:0000313|EMBL:ABM59215.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrob
CoA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_797_78
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85395..86375)
DNA (981bp) protein (327aa)
Uncharacterized protein UPF0065 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNK9_VEREI
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM59216.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter
SCNpilot_BF_INOC_scaffold_797_79
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86530..87492)
DNA (963bp) protein (321aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BP56_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38101.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
SCNpilot_BF_INOC_scaffold_797_80
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87529..89127)
DNA (1599bp) protein (533aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QIP5_RHOPT
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ACF01398.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="
SCNpilot_BF_INOC_scaffold_797_81
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89182..91596)
DNA (2415bp) protein (805aa)
trimethylamine-N-oxide reductase (cytochrome c) (EC:1.7.2.3)
Trimethylamine-N-oxide reductase (Cytochrome c) {ECO:0000313|EMBL:ABD06202.1}; EC=1.7.2.3 {ECO:0000313|EMBL:ABD06202.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF310
SCNpilot_BF_INOC_scaffold_797_82
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91831..93132)
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RI68_9RHOO
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
major facilitator superfamily MFS_1
SCNpilot_BF_INOC_scaffold_797_83
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93703..94047
DNA (345bp) protein (115aa)
Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXR2_METNO
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL62894.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
SCNpilot_BF_INOC_scaffold_797_84
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94273..95034
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036274A2
Transcriptional regulator {ECO:0000313|EMBL:GAD24568.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
transcriptional regulator, IclR family
SCNpilot_BF_INOC_scaffold_797_85
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95053..97230)
DNA (2178bp) protein (726aa)
Penicillin-binding protein 1C n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VS12_POLNA
penicillin-binding protein 1C
Penicillin-binding protein 1C {ECO:0000313|EMBL:ABM38440.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" sour
SCNpilot_BF_INOC_scaffold_797_86
unknown

Not on your lists

97347..97901
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_797_87
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97917..98054)
DNA (138bp) protein (46aa)
id=5082063 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082063 Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_BF_INOC_scaffold_797_88
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98151..98786)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0002DB4080
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
SCNpilot_BF_INOC_scaffold_797_89
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99039..99479
DNA (441bp) protein (147aa)
Universal stress protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WD1_RHOFD
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
SCNpilot_BF_INOC_scaffold_797_90
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99529..99975)
DNA (447bp) protein (149aa)
Transcriptional regulator, ArsR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XLR2_VARPD
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AGU53060.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
Displaying items 61-90 of 126 in total

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