ggKbase home page

SCNpilot_BF_INOC_scaffold_797

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_797_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..485
DNA (483bp) protein (161aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Comamonas testosteroni S44 RepID=D8DDQ2_COMTE
cytochrome c oxidase, subunit II
SCNpilot_BF_INOC_scaffold_797_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

583..2124
DNA (1542bp) protein (514aa)
cytochrome oxidase subunit I n=1 Tax=Variovorax paradoxus RepID=UPI00037A7F85
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:EJL71567.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
cytochrome c oxidase subunit i
SCNpilot_BF_INOC_scaffold_797_3
unknown

Not on your lists

2151..2264
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_797_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2280..2573
DNA (294bp) protein (98aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 n=2 Tax=Alicycliphilus denitrificans RepID=E8U1F1_ALIDB
cytochrome c oxidase assembly protein CtaG/Cox11
Cytochrome c oxidase assembly protein CtaG/Cox11 {ECO:0000313|EMBL:AEB86276.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
SCNpilot_BF_INOC_scaffold_797_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2573..2869
DNA (297bp) protein (99aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 n=2 Tax=Acidovorax RepID=A1WBM2_ACISJ
cytochrome c oxidase assembly protein
Cytochrome c oxidase assembly protein CtaG/Cox11 {ECO:0000313|EMBL:ACM34291.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
SCNpilot_BF_INOC_scaffold_797_6
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2866..3180
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKP2_METPP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_797_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3188..4069
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit III n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF19_ACIET
cytochrome c oxidase subunit III
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:ACM34289.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax eb
SCNpilot_BF_INOC_scaffold_797_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4142..4378)
DNA (237bp) protein (79aa)
Putative transmembrane protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1E8_ALIDB
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:GAO24825.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
SCNpilot_BF_INOC_scaffold_797_9
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4394..5122
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EBK0_9BURK
Transmembrane cytochrome oxidase {ECO:0000313|EMBL:KJA10655.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax tem
cytochrome oxidase
SCNpilot_BF_INOC_scaffold_797_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5157..5801
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZC4_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94481.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_797_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5854..6987
DNA (1134bp) protein (378aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 id=12549791 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cytochrome oxidase assembly
SCNpilot_BF_INOC_scaffold_797_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6984..7889
DNA (906bp) protein (302aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=5082463 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
protoheme IX farnesyltransferase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_797_13
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7901..8512
DNA (612bp) protein (204aa)
Electron transport protein SCO1/SenC n=2 Tax=Acidovorax RepID=A1WBL4_ACISJ
electron transport protein SCO1/SenC; K07152 Tax=GWA2_Curvibacter_64_110_curated
electron transport protein SCO1/SenC
SCNpilot_BF_INOC_scaffold_797_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8599..9585)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF10_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34280.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_BF_INOC_scaffold_797_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9754..10692)
DNA (939bp) protein (313aa)
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF09_ACIET
RNA polymerase sigma-32 subunit RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria;
SCNpilot_BF_INOC_scaffold_797_16
unknown

Not on your lists

10913..11356
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_797_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11457..12368)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123T4_POLSJ
LysR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_797_18
unknown

Not on your lists

comp(12535..12747)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_797_19
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12996..13499
DNA (504bp) protein (168aa)
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45); K10220 4-oxalmesaconate hydratase [EC:4.2.1.83] Tax=GWA2_Curvibacter_64_110_curated
4-oxalomesaconate hydratase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVL1_9BURK
4-oxalomesaconate hydratase
SCNpilot_BF_INOC_scaffold_797_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13696..14379
DNA (684bp) protein (228aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=4 Tax=Bacteria RepID=A9C0K5_DELAS
hypothetical protein
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:EPD35058.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
SCNpilot_BF_INOC_scaffold_797_21
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14528..15460
DNA (933bp) protein (311aa)
Amidohydrolase 2 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHP5_9BURK
2-pyrone-4,6-dicarboxylate hydrolase {ECO:0000313|EMBL:EXU79829.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas
amidohydrolase 2
SCNpilot_BF_INOC_scaffold_797_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15602..16966
DNA (1365bp) protein (455aa)
pcmA; protocatechuate 4,5-dioxygenase (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS84_9BURK
Protocatechuate 4,5-dioxygenase {ECO:0000313|EMBL:EHL24726.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_BF_INOC_scaffold_797_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17022..17981
DNA (960bp) protein (320aa)
Oxidoreductase domain protein n=2 Tax=Delftia RepID=A9C0K1_DELAS
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABX37074.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
SCNpilot_BF_INOC_scaffold_797_24
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18031..19053
DNA (1023bp) protein (341aa)
Aldo/keto reductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS87_9BURK
Aldo/keto reductase {ECO:0000313|EMBL:EHL24729.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
aldo/keto reductase
SCNpilot_BF_INOC_scaffold_797_25
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19177..19923
DNA (747bp) protein (249aa)
Protein tyrosine/serine phosphatase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TVR0_ACIAC
protein tyrosine/serine phosphatase
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ABM35048.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_BF_INOC_scaffold_797_26
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19937..20965)
DNA (1029bp) protein (343aa)
Exopolyphosphatase {ECO:0000313|EMBL:CDS49335.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CDS49335.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pola
Metaphosphatase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y153_RAMTT
ppx; Metaphosphatase
SCNpilot_BF_INOC_scaffold_797_27
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21021..22730)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CYA5_9BURK
putative inner membrane transmembrane protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_797_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22833..23087)
DNA (255bp) protein (85aa)
50S ribosomal protein L31 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ41_9BURK
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
50S ribosomal protein L31
SCNpilot_BF_INOC_scaffold_797_29
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23200..24537)
DNA (1338bp) protein (446aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=365046 specie
transcription termination factor Rho n=1 Tax=Variovorax paradoxus RepID=UPI00035D84E3
rho; transcription termination factor rho
SCNpilot_BF_INOC_scaffold_797_30
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24791..25123)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ39_9BURK
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
thioredoxin
Displaying items 1-30 of 126 in total

View Taxonomy