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SCNpilot_BF_INOC_scaffold_797_29

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(23200..24537)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=365046 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 421.0
  • Bit_score: 774
  • Evalue 8.80e-221
transcription termination factor Rho n=1 Tax=Variovorax paradoxus RepID=UPI00035D84E3 similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 421.0
  • Bit_score: 774
  • Evalue 4.80e-221
rho; transcription termination factor rho similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 421.0
  • Bit_score: 774
  • Evalue 1.80e-221

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGCACCTGAACGAACTCAAAGTACTGCACGTGTCCGAACTGCTCAAGCAGGCCGAGGCACTGGAGATCGACAACGCCAGCCGCATGCGCAAGCAGGAGCTGATGTTCGCCCTCATCAAGAAGCGCGCCAAGGCCGGCGAGCAGGTGTTTGCCGACGGCGTGCTGGAAATCCTGCCCGACGGCTTCGGCTTCCTGCGCAGCCCCGACACCAGCTACACCGCCAGCACCGACGACATCTACATCAGCCCCAGCCAGGTACGCCGCTTCAACCTGCACACCGGCGACATGATCGAGGGCGAGGTGCGCATCCCGAAGGACGGCGAGCGCTACTTCGCGCTGACCAAGCTGGACGCCGTCAACGGCGGCCCGGCCGAGCAGAACAAGCACAAGGTGATGTTCGAGAACCTCACGCCGCTGTTCCCGCGCGAGCAGATGAGGCTCGAGCGCGAGAACTTCAAGGGCGAGGAGAACATCACCGGCCGCATCATCGACGTCATCGCCCCCATCGGCAAGGGCCAGCGCGCGCTGATCGTGGCGCCGCCCAAGAGCGGCAAGACGGTGATGATGCAGACCATCGCGCACGCCATCAGCGCCAACTACCCCGACATCCACATGATGGTGCTGCTGATCGACGAGCGCCCCGAGGAGGTGACGGACATGCAGCGCTCGGTCAAGGGCGAGGTGATCGCCTCGACCTTCGACGAGCCGGCCGCGCGCCACGTGCACGTGGCCGAGATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAACTGAAGAAGGACGTGGTGATCCTGCTGGACTCCATCACCCGCCTGGCGCGCGCCTACAACAACGTCGTGCCGTCTTCCGGCAAGGTGTTGACCGGCGGCGTGGACGCCAACGCCCTGCACCGGCCCAAGCGCTTCCTGGGCGCGGCGCGCAACGTGGAAGAAGGGGGCTCGCTCACCATCATCGCCACCGCCCTGATCGACACCGGCAGCCGCATGGACGAGGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGATCCACCTGGACCGCCGCCTGTACGAAAAGCGCGTGTTCCCCAGCATCCAGCTCAACCGCTCGGGCACACGCCGCGAAGAGCTGCTGCTGGCGCCCGAGGTGCTGCAAAAGACCCGCATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAGTCGATGGAAATGGTCATCAAGAGCATGAAGGCGACCAAGACCAACGTCGAGTTCTTCGACATGATGCGGCGGGGCGGCGCGGCCACGTGCTCGCCGCCAGAGGCGGCGGCCCTTCGGCCGGCACAGGTCCGGCCACGGCGATTGATGGCCTGA
PROTEIN sequence
Length: 446
MHLNELKVLHVSELLKQAEALEIDNASRMRKQELMFALIKKRAKAGEQVFADGVLEILPDGFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRIPKDGERYFALTKLDAVNGGPAEQNKHKVMFENLTPLFPREQMRLERENFKGEENITGRIIDVIAPIGKGQRALIVAPPKSGKTVMMQTIAHAISANYPDIHMMVLLIDERPEEVTDMQRSVKGEVIASTFDEPAARHVHVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFLGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIHLDRRLYEKRVFPSIQLNRSGTRREELLLAPEVLQKTRILRQFMYNMDEIESMEMVIKSMKATKTNVEFFDMMRRGGAATCSPPEAAALRPAQVRPRRLMA*